CCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTATTTGGTACTTCTTATATTGCAATAAAAAGAAAGAAAATGGTAACCT
TCTCAGCCATTTGGGAAGAGAGTATAGTATAAAAATTAAATGTCAGTTCT
TGTATCGGTCAAGATGCATGTAAGCTCTGAAAAGTAATGTGGATAGTCTT
AGTCACAAGACTACACTACAGTTCTTTTTAATACAGGGGTGTTTATAAAT
GACATCTGTGTATAGCTTCATGCCTTACAAATTGTATTTTAATCTCTTTC
CACGCTTAGTGATGATTGAAAATACTGGATATGTAAAATTTCTCTGCAGC
AGATGTAATTCCCAGAAGGAAAATTACCTTTTAAAGGTGCTAAATTCAAT
TGTATGTGAGTGGTTATGTGGTGCTTATAAGTATTAAGCAGTTGCATAAA
AGATGGGAAAAGCAAAGGATTGTGATTCCACAAAACTTTGTTGAATATCC
ATATGTATGGTGGAATAATTATGTAGAGGAAAATCAAAAATGTACCTGAT
ACCTGACAATGGTCCTATTATCAGTTAGTCTGAACTTTTCTGCTAGATGA
ATACAAATGTAACTGAAGCTTAAATACTGCATGCACAGATATGAAAAACT
ATAATGTTATTGAATCTGATGAAGAAACAGAAAATATCTCTTATGGATTA
CTTAAG

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTCCTTTTCCATGTTCTTTATAAACTT
TATGATCTAAAGTTTATCTCTCAGAATCTCTTGGGACCTTCAGAATTAAA
CCCCCTAGCTGTTCTTCCTCTGTATTCTTCTCCAGGCTATGCAATGCTGT
TAGTAAAATTGCAAATTTACACTTAGGTCTTTCAAAACAAATGATATTTA
CTCTCTCTTAAGCCTTAAATCCTCACACAGTTTTCATTGTTATCCAAACT
CTATCTATGTTCTATCCACCAGGACATATTTTTCAACCCTTTCTGAATTT
TCTAGTTTCTCGAGTACCCAAAATACATCCGCAGTTTATATTTCTTATGG
AAAGTAAGTCCAATGAGATACAAACCTTTGCCACTTAGTACTTTCTAATT
CCAGATTCCCTCCACACCCATTATCTCCTCCTACCTGGCCTCAAGCCTAA
TGTGAGTTCCTCCATCTGTTTTCCCTTCTCTGCTTTTTCAGGAATGCACT
TCATAAATTATTCTCTCATCTGTGCTTCCTTTTCTATGTCCTTTTGTCAT
AAAGCTTCTACTATTTTCCATTGAGATATATTCTCTTGTGTCTAAAAAAT
AGATAATTAAACAAAGTCCACAGATTTAATCCCATGACTCTAGTCCCCTT
AA

Query= MSMg01no095_b17.b1 MSMg01no095_b17.b1 CHROMAT_FILE:
MSMg01no095_b17.b1 PHD_FILE: MSMg01no095_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:01 2005
         (632 letters)



>mm_chr5_69504951_69505982
          Length = 1032

 Score = 1176 bits (608), Expect = 0.0
 Identities = 623/628 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctatttggtacttcttatattgcaataaaaagaaagaaaatggtaaccttctcag 64
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatttgggatttcttatattgcaataaaaagaaagaaaatggtaaccttctcag 264

                                                                       
Query: 65  ccatttgggaagagagtatagtataaaaattaaatgtcagttcttgtatcggtcaagatg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccatttgggaagagagtatagtataaaaattaaatgtcagttcttgtatcggtcaagatg 324

                                                                       
Query: 125 catgtaagctctgaaaagtaatgtggatagtcttagtcacaagactacactacagttctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgtaagctctgaaaagtaatgtggatagtcttagtcacaagactacactacagttctt 384

                                                                       
Query: 185 tttaatacaggggtgtttataaatgacatctgtgtatagcttcatgccttacaaattgta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttaatacaggggtgtttataaatgacatctgtgtatagcttcatgccttacaaattgta 444

                                                                       
Query: 245 ttttaatctctttccacgcttagtgatgattgaaaatactggatatgtaaaatttctctg 304
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttaatctctttccacgcttaatgatgattgaaaatactggatatgtaaaatttctctg 504

                                                                       
Query: 305 cagcagatgtaattcccagaaggaaaattaccttttaaaggtgctaaattcaattgtatg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagcagatgtaattcccagaaggaaaattaccttttaaaggtgctaaattcaattgtatg 564

                                                                       
Query: 365 tgagtggttatgtggtgcttataagtattaagcagttgcataaaagatgggaaaagcaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagtggttatgtggtgcttataagtattaagcagttgcataaaagatgggaaaagcaaa 624

                                                                       
Query: 425 ggattgtgattccacaaaactttgttgaatatccatatgtatggtggaataattatgtag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggattgtgattccacaaaactttgttgaatatccatatgtatggtggaataattatgtag 684

                                                                       
Query: 485 aggaaaatcaaaaatgtacctgatacctgacaatggtcctattatcagttagtctgaact 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggaaaatcaaaaatgtacctgatacctgacaatggtcctattatcagttagtctgaact 744

                                                                       
Query: 545 tttctgctagatgaatacaaatgtaactgaagcttaaatactgcatgcacagatatgaaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttctgctagatgaatacaaatgtaactgaagcttaaatactgcatgcacagatatgaaa 804

                                       
Query: 605 aactataatgttattgaatctgatgaag 632
           ||  ||||||||||||||||||||||||
Sbjct: 805 aaaaataatgttattgaatctgatgaag 832


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space:   635684
Effective search space used:   635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no095_b17.g1 MSMg01no095_b17.g1 CHROMAT_FILE:
MSMg01no095_b17.g1 PHD_FILE: MSMg01no095_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:01 2005
         (290 letters)



>mm_chr5_69618506_69619195
          Length = 690

 Score =  553 bits (286), Expect = e-162
 Identities = 289/290 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttccttttccatgttctttataaactttatgatctaaagtttatctctcagaatctctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tttccttttccatgttctttataaactttatgatctaaagtttatctctcagaatctctt 431

                                                                       
Query: 61  gggaccttcagaattaaaccccctagctgttcttcctctgtattcttctccaggctatgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gggaccttcagaattaaaccccctagctgttcttcctctgtattcttctccaggctatgc 371

                                                                       
Query: 121 aatgctgttagtaaaattgcaaatttacacttaggtctttcaaaacaaatgatatttact 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 370 aatgctgttagtaaaattgcaaacttacacttaggtctttcaaaacaaatgatatttact 311

                                                                       
Query: 181 ctctcttaagccttaaatcctcacacagttttcattgttatccaaactctatctatgttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctctcttaagccttaaatcctcacacagttttcattgttatccaaactctatctatgttc 251

                                                             
Query: 241 tatccaccaggacatatttttcaaccctttctgaattttctagtttctcg 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tatccaccaggacatatttttcaaccctttctgaattttctagtttctcg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space:   191361
Effective search space used:   191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)