GCGGCGCTATACGACTCACTATATCGAGAGATCCGCGGAATTCACTCCAA
TCACGAAACCATCAACAGTGAGTATGGGCTCATTTGTCAAAGCATTAACA
ATGGGTAGCTGAGATGGCTCACCAGGTAAGTGTACCTACCACCTAGCCTG
AGGAGCTGAGTATGAGTCTAGGACCCTCAGGGTTGAAAGGAAGACTAACT
TCTAACAAGTTGTCCATTAACCATTGCACATTCCTCTCAACACACACATG
CGCACGCACACGCACACACGCATGCATAAGATAAAATAAATAAATCTAAG
ATAAGATAAAATAAATAAATCTAATAACTAAAAGACCTTTAACAATATGT
GTGTGCAGAATTCTTTTCACAGTATGGCCCGCATATGTGCTCCCACAGTG
GGAAGTATCACCTTCCATCTGAATTCTGATACATTTTATTTAATCAAGGG
CATGAGTTACATGAGTTACGTGAAAGGAACTGACCATGCTGTTAGTGATA
AAGCTATAACCTCCCTCTGTGTTATAATCCTAGTGCAATTTTAGTTAAAG
GTGCAGACAAACAGGAAATTAAATTTAGAAGGGCAAGCATCGCTTCTCGG
CCTTTTGGCTAAGATCAAGTGTAGAAGGGTAAGCATGTAAACACCCCAAG
GGAGAGTGACAGAAAGGCAAAGCCACCCCTAAACCTCAGCTTGCCCATTT
GCAA

TATTTTATTTTTATGATTTTCTTCTCTTTTTTTTTTTTTTTTTTTTCTTC
CCCAATTTTCTTTTACCCTCTGAGGACNTTTTTCTGAGGGNNNNTNCGCG
CTTCTATAAAGGTTTCNGAGAGNNNTTTNNCTTTTCTCCAAAAGGGAGGG
GAAGGGNNNNNNNNTTCTCCCTTCCCCTTTTTTATTTTTTTTCCCCCCAA
AAAAAGGGGTGTTTTTTTTTTTTTCTTTTCTTTTTTTTATTGTATGTTGG
TTTGTGTTTTTTTTCTTTTATTGTTTTTTTTTTTTTCTCCCCCCCCCCTC
TAATAAAAAAAAATAGTGGGGGTCCTTTTTTCTATTTATTTTTCTTTTTC
TCTCTATTTTTCTCTTCTTTTCTTCCTTCTCTTCTTTTTTTTTTCTTTCC
CCTCTCCCTTTACTCTTTCTCTCTTTCTCACATTTTTTTTTTTTCCCCCC
CTCCCACTCCCTATTCTCTCNCGATACCACTTCTTTTTTTTTTTTTTTTT
CCCCCCCCCCCCCCCCCCCTTGTTTTTCTTTCTTCCTTTTATCCTCTCTC
TTCTATCTCCTTCTCCCCCTTACTCTCAAAAAAAAATATCTCTTTTTTCT
GGGGGGGGGGGTTCTTCTTTATCTCCTCTTCCTTTTTCCCTTTCTTTTTT
TCTTTTTTTCCACTTCTTTTTCCTTTTTTTTTTCTCCTTTTTTTTTCTCT
TTTTTTTCCCCTCCCTCCCTGTTTTGGCCTTTCCACATGCTTTGTTACCT
GTCTATTTTTCCGTCTTTTCCCCTCCCCCTCTCCCCCTGCTGTTTTTATT
TTCCTTTCCTCCACCCTGTCCTTCATATTTCCTTACCTCTTGATGTACTC
TTCTGCCCTCCCCTTTTGTCTCCCTCCTCTTTGTGTGCANTTTGATTCCT
CCCTCCTGTTTTATTTTTTCTACTCCTGCCCTATCCCCTACTGTTGCTGT
CACCTTTTCCTGTTGTCTGATTTTATCTCCC

Query= MSMg01no095_n23.b1 MSMg01no095_n23.b1 CHROMAT_FILE:
MSMg01no095_n23.b1 PHD_FILE: MSMg01no095_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:01 2005
         (512 letters)



>mm_chr5_108466145_108467057
          Length = 913

 Score =  891 bits (461), Expect = 0.0
 Identities = 473/477 (99%), Gaps = 1/477 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggctcaccaggtaagtgtacctaccacctagcctgaggagctgagtatgagtctaggac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 tggctcaccaggtaagtgtacctaccacctagcctgaggagctgagtatgagtctaggac 821

                                                                       
Query: 61  cctcagggttgaaaggaagactaacttctaacaagttgtccattaaccattgcacattcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 cctcagggttgaaaggaagactaacttctaacaagttgtccattaaccattgcacattcc 761

                                                                       
Query: 121 tctcaacacacacatgcgcacgcacacgcacacacgcatgcataagataaaataaataaa 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 760 tctcaacacacacatgcgcacgcacatgcacacacgcatgcataagataaaataaataaa 701

                                                                       
Query: 181 tctaagataagataaaataaataaatctaataactaaaagacctttaacaatatgtgtgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tctaagataagataaaataaataaatctaataactaaaagacctttaacaatatgtgtgt 641

                                                                       
Query: 241 gcagaattcttttcacagtatggcccgcatatgtgctcccacagtgggaagtatcacctt 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 640 gcagaattcttttcacagtatggcccgcatatgtgttcccacagtgggaagtatcacctt 581

                                                                       
Query: 301 ccatctgaattctgatacattttatttaatcaagggcatgagttacatgagtt-acgtga 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 580 ccatctgaattctgatacattttatttaatcaagggcatgagttacatgagttaacgtga 521

                                                                       
Query: 360 aaggaactgaccatgctgttagtgataaagctataacctccctctgtgttataatcctag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aaggaactgaccatgctgttagtgataaagctataacctccctctgtgttataatcctag 461

                                                                    
Query: 420 tgcaattttagttaaaggtgcagacaaacaggaaattaaatttagaagggcaagcat 476
           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgcaattttagttgaaggtgcagacaaacaggaaattaaatttagaagggcaagcat 404


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 913
Length adjustment: 10
Effective length of query: 502
Effective length of database: 903
Effective search space:   453306
Effective search space used:   453306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)