Query= MSMg01no097_i14.b1 MSMg01no097_i14.b1 CHROMAT_FILE:
MSMg01no097_i14.b1 PHD_FILE: MSMg01no097_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:19 2005
(288 letters)
>mm_chr5_132980280_132980968
Length = 689
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 ggtctctgccttgattttctaccctgatttccctctgtgaactgtaaccccgaagtaagg 60
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 627 ggtctctgccttgatttcctaccctgatttccctctgtgaactgtaacaaggaagtaagg 568
Query: 61 gatgaaataaagtctttacttccctaagttgcttttggtcgatatttgtcaaagccacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gatgaaataaagtctttacttccctaagttgcttttggtcgatatttgtcaaagccacag 508
Query: 121 aatgaaaggagactatgaagtgat-acactgttcttattcccagcatacaaccttcatct 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 507 aatgaaaggagactatgaagtgataacactgttcttattcccagcatacaaccttcatct 448
Query: 180 ctgtgttctgcttgagggcagggtgggtgtcctcgctatgtccgtggaccctgtacctca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctgtgttctgcttgagggcagggtgggtgtcctcgctatgtccgtggaccctgtacctca 388
Query: 240 ggtgtagtttgattgcctggttgagcatgggaacaaggcattggagctt 288
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggtgtagtttgattgcctggttgagcatgggaacaaggcattggagctt 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no097_i14.g1 MSMg01no097_i14.g1 CHROMAT_FILE:
MSMg01no097_i14.g1 PHD_FILE: MSMg01no097_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:19 2005
(356 letters)
>mm_chr5_132793674_132794429
Length = 756
Score = 673 bits (348), Expect = 0.0
Identities = 354/356 (99%)
Strand = Plus / Plus
Query: 1 ctcccagtccctaactaccgtgaatgaatacccggctcgatcttcagccaactgtttcta 60
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 201 ctcccagtccctaactaccgtgaatgaatacccagctccatcttcagccaactgtttcta 260
Query: 61 gaaagtagtgaacctggggatacgagagatctccacattggacaaatgaaccagtgtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagtagtgaacctggggatacgagagatctccacattggacaaatgaaccagtgtttg 320
Query: 121 ggtagctctcatgttgtacgagattcccgagtgagtaatatctaacacttaggaactgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtagctctcatgttgtacgagattcccgagtgagtaatatctaacacttaggaactgag 380
Query: 181 agaagactggttttagaggggaaacaaggtgagacagcggacagctggctggggggcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaagactggttttagaggggaaacaaggtgagacagcggacagctggctggggggcatt 440
Query: 241 cctaaatgccagcaccacacagggagacacaggcaatctctgtgaagtcaaggttattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctaaatgccagcaccacacagggagacacaggcaatctctgtgaagtcaaggttattcc 500
Query: 301 agactgcaaaatgagccaatagccagtcagagctacacagtgagatcccatctcaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agactgcaaaatgagccaatagccagtcagagctacacagtgagatcccatctcaa 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
