Query= MSMg01no102_e18.b1 MSMg01no102_e18.b1 CHROMAT_FILE:
MSMg01no102_e18.b1 PHD_FILE: MSMg01no102_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:50 2005
(144 letters)
>mm_chr5_148711134_148711677
Length = 544
Score = 271 bits (140), Expect = 1e-77
Identities = 143/144 (99%)
Strand = Plus / Minus
Query: 1 catgctcccttactgcttggaaaatgggttaaaggattgcggttcttacataggaaaatg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 322 catgctcccttactgcttggaaaatgggttaaaggattgcggttcttagataggaaaatg 263
Query: 61 catcagtgggtcccaggggaagcctgggacaaggagcccgagacagaagtgaatcatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 catcagtgggtcccaggggaagcctgggacaaggagcccgagacagaagtgaatcatcta 203
Query: 121 agacacacacacacacacacacac 144
||||||||||||||||||||||||
Sbjct: 202 agacacacacacacacacacacac 179
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_e18.g1 MSMg01no102_e18.g1 CHROMAT_FILE:
MSMg01no102_e18.g1 PHD_FILE: MSMg01no102_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:51 2005
(230 letters)
>mm_chr5_148588654_148589283
Length = 630
Score = 414 bits (214), Expect = e-120
Identities = 226/230 (98%)
Strand = Plus / Plus
Query: 1 aggacctctggtagaagtaccatgtgtttttaacccctgagccctctctccagccctgaa 60
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 87 aggacctctggtagaagtaccatgtatttttaacccctgagccctctcttcagccctgaa 146
Query: 61 tgggtttattttatctaataattgcactctctgtgtggtggggaggtcaaggcgtcagga 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 147 tgggtttattttatctaataattgcactctctgtgtggaggggaggtcaaggcgtcagga 206
Query: 121 gtgtgaagtgtctgctcacactccatccatggtcagaagtgtgaagtgtctgctcacact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gtgtgaagtgtctgctcacactccatccatggtcagaagtgtgaagtgtctgctcacact 266
Query: 181 ccatccatgatcagaagtgtgaagtgtctgctcacactccatccatggtc 230
||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccatccatggtcagaagtgtgaagtgtctgctcacactccatccatggtc 316
Score = 188 bits (97), Expect = 3e-52
Identities = 112/117 (95%)
Strand = Plus / Plus
Query: 114 gtcaggagtgtgaagtgtctgctcacactccatccatggtcagaagtgtgaagtgtctgc 173
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 314 gtcagaagtatgaagtgtctgctcacactccatccatggtcagaagtgtgaagtgtccgt 373
Query: 174 tcacactccatccatgatcagaagtgtgaagtgtctgctcacactccatccatggtc 230
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcacactccatccatggtcagaagtgtgaagtgtctgctcacactccatccatggtc 430
Score = 132 bits (68), Expect = 2e-35
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 114 gtcaggagtgtgaagtgtctgctcacactccatccatggtcagaagtgtgaagtgtctgc 173
||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gtcagaagtgtgaagtgtccgttcacactccatccatggtcagaagtgtgaagtgtctgc 411
Query: 174 tcacactccatccatgatcagaag 197
|||||||||||||||| |||||||
Sbjct: 412 tcacactccatccatggtcagaag 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 4
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
