Query= MSMg01no105_n06.b1 MSMg01no105_n06.b1 CHROMAT_FILE:
MSMg01no105_n06.b1 PHD_FILE: MSMg01no105_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:35 2005
(503 letters)
>mm_chr5_124046645_124047546
Length = 902
Score = 924 bits (478), Expect = 0.0
Identities = 490/494 (99%), Gaps = 1/494 (0%)
Strand = Plus / Minus
Query: 10 gaattctaaaaatacccatatgaatgctacaatacagctaggcacctcaggcggtcattg 69
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 702 gaattctaaaaataaccatatgaatgctacaatacagctaggcacctcagacggtcattg 643
Query: 70 ttgagataggtgtctgatttatagttgagatgtcttctgtcatttcaaaacctcacatgg 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ttgagataggtgtctgatttatagttgagatgtcttctgtcatttcaaaacctcacatgg 583
Query: 130 attctgaacaaaaaaaagaaagtttaaatatatacaataatgtgagttcttcaatagaag 189
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 attctgaac-aaaaaaagaaagtttaaatatatacaataatgtgagttcttcaatagaag 524
Query: 190 tagacacctggtggccacttttgaggtagatatctgctttatcatttacaaacctcacac 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tagacacctggtggccacttttgaggtagatatctgctttatcatttacaaacctcacac 464
Query: 250 gtattccatcttataaagacagcaggtatactgagctgtcaccatggaaacatcagcttt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gtattccatcttataaagacagcaggtatactgagctgtcaccatggaaacatcagcttt 404
Query: 310 tcctcagggctatttgcaaaacgaggctatggcttgctcttgggggctgaacagggagaa 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tcctcagggctatttgcaaaacgaggctatggcttgctcttgggggctgaacagggagaa 344
Query: 370 gatgggtcaataagtattttgtgaaaagtcacctctgagttaagttatggcagagaatgt 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gatgggtcaataagtattttgtgaaaagtcacctctgagttaagttatggcagagaatgt 284
Query: 430 acaagacctggggctgacattgattgatctaaattggttcatgaaaattggctgccttct 489
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 283 acaagacctggggctgacattgattgatctaaattggttcatgaaaattggttgccttct 224
Query: 490 aaatagacctaaat 503
||||||||||||||
Sbjct: 223 aaatagacctaaat 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 902
Length adjustment: 10
Effective length of query: 493
Effective length of database: 892
Effective search space: 439756
Effective search space used: 439756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_n06.g1 MSMg01no105_n06.g1 CHROMAT_FILE:
MSMg01no105_n06.g1 PHD_FILE: MSMg01no105_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:35 2005
(249 letters)
>mm_chr5_123873797_123874445
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 attctttcttgtctaaaaagagaaaagccattaggagcctatttataggacttggctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctttcttgtctaaaaagagaaaagccattaggagcctatttataggacttggctacc 260
Query: 61 tggggagtgttactttatccttgagtctgctcagtcagtttcagatttcccttactgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggagtgttactttatccttgagtctgctcagtcagtttcagatttcccttactgcta 320
Query: 121 agtaggttatggagctggcagaccgaacctctgaaatgactaatgatagcaaggacatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtaggttatggagctggcagaccgaacctctgaaatgactaatgatagcaaggacatgt 380
Query: 181 tagtctcataggagcagaaatattttgtattagttagagtctcctagaagaacagaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtctcataggagcagaaatattttgtattagttagagtctcctagaagaacagaactt 440
Query: 241 attttttaa 249
|||||||||
Sbjct: 441 attttttaa 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
