Query= MSMg01no106_c18.b1 MSMg01no106_c18.b1 CHROMAT_FILE:
MSMg01no106_c18.b1 PHD_FILE: MSMg01no106_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:13 2005
(167 letters)
>mm_chr5_130933910_130934476
Length = 567
Score = 302 bits (156), Expect = 9e-87
Identities = 165/168 (98%), Gaps = 2/168 (1%)
Strand = Plus / Plus
Query: 1 agtttgtattttcccaagctcc-ccggcatcctgcacacgtccccttcctccaggaaacc 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttgtattttcccaagctcctccggcatcctgcacacgtccccttcctccaggaaacc 260
Query: 60 cagcctgtatctgttagcagcgaaatacgggatcggtatgcgacagatggagagaaaatg 119
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 cagcctgtatctgttagcagcgaaatacgggatcggtaagcgacagatggagagaaaatg 320
Query: 120 ctttgctgaccttaattttagtgatttctagtgtgccaattaaatgtg 167
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 ctttgctgaccttaattt-agtgatttctagtgtgccaattaaatgtg 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no106_c18.g1 MSMg01no106_c18.g1 CHROMAT_FILE:
MSMg01no106_c18.g1 PHD_FILE: MSMg01no106_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:13 2005
(512 letters)
>mm_chr5_131082526_131083437
Length = 912
Score = 603 bits (312), Expect = e-177
Identities = 335/346 (96%), Gaps = 10/346 (2%)
Strand = Plus / Minus
Query: 1 tggaggcatactctacaggaagagtgttgtaccctta-ga--ggtgggagacacaatcca 57
||||||||||||||||||||||||||||||| | | || ||||||||||||||||||
Sbjct: 342 tggaggcatactctacaggaagagtgttgta---tgaggagtggtgggagacacaatcca 286
Query: 58 gtccatgagtggcctttcttcttctttaggaacctccattcaggtaagtccagaatcatg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 gtccatgagtggcctttcttcttctttaggaacctccattcaggtaagtccagaatcatg 226
Query: 118 actgtatctcagaaaagaatgtcaggttaagttttctactt---ttgttgttgttgttgt 174
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 225 actgtatctcagaaaagaatgtcaggttaagttttctacttttgttgttgttgttgttgt 166
Query: 175 tgttataaaacaccatgagtgaaagggacatagggaaaaaagggtgatgttccaagacat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tgttataaaacaccatgagtgaaagggacatagggaaaaaagggtgatgttccaagacat 106
Query: 235 ggtccaccactgaagagaagccagtgtcaacagcttgagacgattggtcccaccacattc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 105 ggtccaccactgaagagaagccagtgtcaacagcttgagacgattggtcccaccaca-tc 47
Query: 295 cacagttagtggaaaagagaaaagtgaatggaccttttccaggttg 340
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 cacagttagtggaaaagagaaaagtgaatggaccttttccaggttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
