Query= MSMg01no107_a22.b1 MSMg01no107_a22.b1 CHROMAT_FILE:
MSMg01no107_a22.b1 PHD_FILE: MSMg01no107_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:22 2005
(358 letters)
>mm_chr5_107736480_107737237
Length = 758
Score = 590 bits (305), Expect = e-173
Identities = 322/333 (96%), Gaps = 10/333 (3%)
Strand = Plus / Minus
Query: 1 actttttcatatggctactgttatttatgaatggcctaatttgctttatcaaagtgaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 actttttcatatggctactgttatttatgaatggcctaatttgctttatcaaagtgaaaa 469
Query: 61 tatgatttctctctcttgtgcacagacactgcttccaatgcagagcaagtgagtgtcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tatgatttctctctcttgtgcacagacactgcttccaatgcagagcaagtgagtgtcact 409
Query: 121 ttaagtttcttctcagatgtttgccacatgtggcgcttagttagcatggagaataatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttaagtttcttctcagatgtttgccacatgtggcgcttagttagcatggagaataatgag 349
Query: 181 tccagagtgacataccccagttccctcttgaaacatcttttcatgaactggctgcatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tccagagtgacataccccagttccctcttgaaacatcttttcatgaactggctgcatgtt 289
Query: 241 ttagtagatgctattatggtcatgctcaagccttgtgtttttt-----actggtacaaac 295
||| ||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 288 ttaatagatgctattatggtcatgctcaagccttgtg-----taggcaactggtacaaac 234
Query: 296 tgacttctgcggcagttcctgctttcccctgac 328
|||||||||||||||||||||||||||||||||
Sbjct: 233 tgacttctgcggcagttcctgctttcccctgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_a22.g1 MSMg01no107_a22.g1 CHROMAT_FILE:
MSMg01no107_a22.g1 PHD_FILE: MSMg01no107_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:23 2005
(274 letters)
>mm_chr5_107560779_107561452
Length = 674
Score = 526 bits (272), Expect = e-154
Identities = 272/272 (100%)
Strand = Plus / Plus
Query: 1 tccctgaatgtgaggacgccatacatataaatgctacagcttgattctgtgcttcccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctgaatgtgaggacgccatacatataaatgctacagcttgattctgtgcttcccaga 260
Query: 61 catcagcggacccacgatgagaagagaagaagactccagcttagactgtgtataacagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcagcggacccacgatgagaagagaagaagactccagcttagactgtgtataacagct 320
Query: 121 actgaacaaacacactggaggacattatatgtaattatctcaggccacagaaatgaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgaacaaacacactggaggacattatatgtaattatctcaggccacagaaatgaagtg 380
Query: 181 acagcaggagaaacctgtcccacacaggcaggcctgacagaacccctgcggtggctccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagcaggagaaacctgtcccacacaggcaggcctgacagaacccctgcggtggctccag 440
Query: 241 cgaggtcaaaggggtctgatttctgttatggc 272
||||||||||||||||||||||||||||||||
Sbjct: 441 cgaggtcaaaggggtctgatttctgttatggc 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
