BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-107B02.T7 (MSMg01no107_b02.b1) | MSMg01-107B02.TJ (MSMg01no107_b02.g1) |
ACC | AG320982 | AG320983 |
length | 1,259 | 1,299 |
length of high quality (start - end) | 331 (137 - 467) | 274 (134 - 407) |
definition | CHROMAT_FILE: MSMg01no107_b02.b1 PHD_FILE: MSMg01no107_b02.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:08:24 2005 | CHROMAT_FILE: MSMg01no107_b02.g1 PHD_FILE: MSMg01no107_b02.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:08:24 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | NCCAAACCTNNNTATACCATTGCGCGCTAXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAGGGCCATACCTAAACATATTAGAAGCCATCTANAGNA
AACCAGNAGNCAANATCACCCTAAAAGGACAGAAGNTGGAAGCAATCCCA
CTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAA
CATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCA
AGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGAT
GATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCT
AAACCTGATAAACAGCTTTGGTGAAGTAGCTGGATATAAAATTAACTCAA
ACAAGTCAATGTTCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAA
ATTAGGGAAACAACTCCGTTCTCCCCAGTCACAAATAATATAAAATATCT
CGGCGTGACTCTAACTAAGGAAGTAAAAGATCTGTATGATAAAAACTTCA
AGCCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTC
CCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCC
AAAAGCAATCTACAGATTCAATGCCATCCCCATCAAAATTCCAACTCAAT
TCTTCAACGAATTAGAAGGAGCCAATTGCAAATTCATCTGGAATAACAAA
AAACCTAGGATAGCAAAAAACTCTTCCCAAGGATAAAAGAACCTCTGGGG
GAATCACCATGCCCGGACCAAAGGCTTTACAACAGGGACATGGGGATAAA
AACTGGCATGGCACTGTTAAAGAAGCCCGAAAAAGTAGACCAATGGAAAT
ACAATTGAAGACCCCCGAATAGGAACCCCCCACCCCCTATGGTCCACTTG
AACCTTTCAACAAAGGAAGCCTAAAAACCTATCCCATTGGAAAAAAAGGA
CAGCCATTTTCCAACCAATTGCTGGCTGGCCACCATCTGGCTTGGTCACC
CCGGGTAAAAGAAATGGCAAAACCGAAATCCCAAACTTATCCCCCCTTGG
GACCCTAAGGGCCAAAATCCTCAATCGGGAACTCATGGGAAATCTTCCAC
CTTAAAACCCCGAAACCCCTCTGTCAACACTTTATTAAAGGGCAATAAAA
CGGTCGGTAATACAAAGCCTCTGAAAGACAAATCGGGGCAACCAGGGGCC
ATAAACAAT
| NCCAATTTTTNTCTCAACATGCGATGCTGGGGXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTTTAAAGCCAGCATTTTAG
TCACTGAAGAGGCAGAAGACCTTAATGGCTCCTGAAGCTGCTTGTGTGAA
ATTTGAAGTTCTAGAAGATTCTGAATAACTATAAATTCCAGGTTGGGGGG
AGATGCTATCTGATTTTCAGTCTGCGTGTCTGTCGTCTCCCCAGAATTTC
ACAGGTAGGATGAGTGTATGTCAGCTTGGCATGAGATGCTCTGTTTTGAT
CCATTTAATTTAGACACTTGTTATAATGTAAGTGCTTTTGCTTTCACTTT
GGCAATTGGCATGCAATTTTAATTAGCACTTGGAACACAATAGAATGTGT
TGATGAATTTTTTGACATGAAGAAATACGTTCATAATGGCCTGTCTTGAG
GACTCTGGCAGCATCCAAAAACGACATTCTCAGTGTACTGCACAGGATTT
CTGAGAACTCAGCCTGGCTGCCATTTATGCTCTTATATATTAATCATCTC
AGTGTTTTCAGATGTCAAAATATTGGCATGAGCAGAGTTGTCATCTATGC
TGCACCAAGATTACCAATTTCTCTATTATCCTGATAAAGTGGCCAATGTA
TAAAGAAACGATGTATTTTCTATGCCTTGCCAGACTTCTCTTCCAACCTC
CGTCATCCATGTCTTCCTAAGTTGTTAAGCCCCCTCAGCCATCTTCTTAC
CAGCATTTCCTCCTAATTGCTCCGCTTGCTTTCTGTTTATAACTACTTTT
CCGCCTTCTGGCAACCTTGAGACTGGTGCTGTATGTTCATTTTGTTCATA
AAAGAATTCCCCTTCCCTGCTTGACTCTTTTTGCTTATTCACCATTGTTA
TTCTTGTTTCACGGTCCTATAAGTTCTCCCCTGTTTATACATATTTAAGG
TCTTATGGTCTGTTGATATTGTGGTTTCCAATAATGTGGTCTTCAATTTT
CTTGGCAATATGAACTCCTTTTTCTGTTATCAATCCTTTTTCCTTGTATC
CCGGCTGTCCCAGTCCTCTCTTGTTCTTGTCCAGAAATGCAATTGACTAT
TTCAAAATGTGCCTTCAAATCTTCTCTGTAACAACTTGTCCTTCTCTCCC
GTCACTCTTTCAATTTGCGTATTCCCCTATAAAAAATACTCTTTTTCTCA
TATATAATATCTTCTCTCTCACCCTCTCTGTAAATGTTTCTCGTCTCTTC
CGTCCTCTCCGTATAACTATATTCTTCTTCGTACTTTATCTCCTCCCTT
|
quality values | Open.Hide. 0 3 8 8 9 9 9 9 3 0 0 0 3 9 9 9 11 11 8 6 6 8 8 8 10 10 8 8 8 11 8 13 13 19 8 8 8 6 6 10 19 22 25 28 20 28 24 24 24 24
37 33 33 33 33 28 27 27 16 17 8 8 8 9 9 9 9 19 23 29 30 22 19 15 9 6 6 6 6 6 6 8 8 9 9 9 11 12 18 12 11 10 19 18 3 0 3 3 0 3
27 29 59 27 27 3 0 3 3 0 3 25 3 0 3 21 11 11 10 9 8 8 8 8 8 8 8 8 8 10 10 10 12 23 3 0 3 25 25 39 47 47 59 59 59 59 48 59 57 50
47 47 47 47 48 57 57 48 57 57 57 48 36 36 37 36 36 42 54 54 54 57 57 57 57 57 57 57 50 50 50 50 54 51 68 68 68 50 50 50 50 50 47 47 47 57 57 68 68 68
68 68 57 57 57 57 57 57 57 57 57 57 47 47 50 47 47 57 57 44 44 43 43 43 57 57 57 57 57 57 57 50 52 52 52 52 52 52 52 52 52 52 52 57 52 52 52 57 57 57
57 57 57 52 52 52 52 52 52 52 52 52 43 43 35 43 43 43 43 52 52 52 57 57 57 57 52 52 52 43 43 52 52 52 52 57 57 57 52 52 52 52 57 57 57 57 45 45 45 52
52 52 57 57 43 43 35 43 43 52 52 52 52 57 57 57 52 43 43 39 39 43 59 59 59 57 43 43 39 43 57 57 57 57 57 57 57 43 43 37 43 43 57 52 57 57 57 59 57 52
52 52 52 52 57 50 52 43 43 37 50 50 57 57 57 57 54 54 52 52 52 52 52 52 52 42 42 37 43 35 43 43 57 57 57 57 57 48 50 44 43 43 43 59 59 57 57 47 43 43
57 59 44 47 43 40 36 24 24 11 11 11 12 11 12 34 29 57 57 59 57 68 68 68 57 57 47 47 46 46 46 43 43 43 43 46 46 48 48 48 43 43 43 43 43 43 43 48 39 39
39 43 43 47 39 39 33 33 43 34 37 19 19 13 13 13 18 18 18 18 11 8 8 8 8 8 10 10 13 23 34 39 48 43 59 43 43 43 39 39 39 30 30 16 19 19 32 32 42 43
43 43 32 31 23 23 28 37 42 46 48 54 54 54 57 46 43 43 43 37 46 46 43 43 43 39 39 32 32 32 32 31 31 25 25 25 33 33 32 35 35 39 47 47 47 40 39 39 47 28
28 13 13 13 28 28 37 34 24 22 25 25 31 31 24 14 13 17 17 13 15 15 26 26 29 20 23 23 32 32 28 28 15 18 17 23 23 22 28 20 23 23 32 32 40 28 32 32 32 32
43 43 48 39 39 35 35 35 39 39 43 43 43 37 29 18 11 11 11 20 29 37 37 44 46 47 48 47 37 30 21 14 14 24 26 36 32 37 32 32 35 36 25 24 11 11 11 16 16 26
26 37 33 33 32 28 28 32 37 39 37 37 22 17 12 15 8 8 8 12 18 25 25 11 11 9 14 11 13 17 14 22 24 24 28 21 19 9 9 8 15 8 9 9 14 24 28 18 16 11
11 13 13 14 19 12 12 12 13 15 14 15 17 11 10 10 13 11 15 17 23 12 11 8 8 9 9 13 9 13 10 10 12 12 10 11 11 13 18 15 16 16 16 20 19 24 17 17 15 23
15 16 16 13 12 14 14 12 12 13 13 19 13 11 11 11 16 23 19 15 13 13 10 8 8 10 7 9 9 13 8 15 11 10 9 11 11 10 10 14 14 16 18 30 30 21 9 9 10 10
9 13 10 10 11 11 11 17 16 21 16 12 10 10 10 12 10 9 8 8 9 8 8 9 10 16 21 13 12 9 9 9 9 12 11 6 8 6 6 8 8 8 8 8 8 10 13 15 19 18
10 10 10 12 8 10 12 13 16 16 10 8 8 8 8 7 7 7 8 8 8 8 10 8 8 8 8 10 10 8 9 10 9 9 9 9 11 11 11 15 10 9 9 9 9 12 15 11 10 10
10 10 8 8 8 8 12 12 10 9 9 10 10 17 10 11 9 9 9 8 8 8 6 10 15 20 20 20 18 11 10 10 9 10 10 9 11 10 10 10 8 6 8 8 8 8 8 12 12 8
8 8 8 8 8 8 8 9 9 9 11 16 13 10 10 10 12 10 10 10 12 12 11 10 13 10 10 10 8 8 9 9 8 8 8 8 8 8 8 8 8 9 8 9 10 15 11 11 11 11
9 10 12 10 8 8 8 8 10 10 17 12 12 10 10 10 10 10 10 14 9 9 8 8 8 9 10 10 9 10 13 7 6 8 8 6 6 8 7 8 8 8 8 8 9 9 9 11 11 11
12 11 11 11 11 13 13 12 11 10 10 10 12 10 8 8 8 8 8 8 10 10 10 10 10 10 10 13 10 9 9 15 19 10 8 8 8 8 8 12 13 10 18 15 25 22 22 12 11 11
13 11 10 8 8 6 6 8 8 11 9 10 11 10 6 8 6 6 7 8 9 8 8 8 8 8 8 9 13 10 10 6 8 8 8 8 8 8 8 6 8 8 9 9 9 9 8 6 6 9
13 12 14 12 12 12 23 23 13 8 8 8 8 8 8 10 10 11 15 11 10 10 9 10 11 11 13 10 11 13 10 10 9 8 8 7 6 8 6 6 6 8 10 13 8 8 11 12 11 11
8 8 8 6 6 6 8 8 10 9 9 7 8 8 6 6 6 6 8 8 10 11 13 13 13 9 8 6 8 8 13 11 10 9 6 10 8 8 8 10 7 6 6 6 8 8 13 10 8 8
6 6 6 11 11 8 8 8 8 | Open.Hide. 0 3 10 10 10 10 10 9 10 3 0 3 9 9 9 10 9 9 9 6 6 6 6 6 6 8 8 6 6 6 6 14 13 15 9 11 9 7 8 8 8 15 15 29 29 29 23 23 17 21
21 12 19 24 28 28 32 30 30 30 30 28 28 30 33 33 37 37 23 23 3 0 3 3 0 3 9 9 9 8 8 9 9 9 8 7 6 9 9 9 9 11 15 25 34 41 42 33 33 33
36 36 36 36 36 36 36 36 47 48 48 48 40 40 34 25 20 9 9 10 9 9 9 9 10 12 12 13 11 11 11 13 15 19 24 26 36 36 38 38 42 42 42 43 47 47 48 48 48 59
59 59 59 59 59 59 57 57 54 43 43 43 41 34 46 46 43 43 46 46 57 57 57 47 54 54 48 57 47 47 47 47 50 47 54 54 57 57 54 48 48 57 48 48 48 48 48 59 48 48
48 57 48 57 57 57 57 57 59 59 57 57 57 59 59 57 57 46 46 44 47 57 57 57 57 57 50 50 50 47 50 52 52 52 57 52 52 57 59 59 59 57 43 43 23 41 32 43 43 52
52 52 57 52 57 57 57 57 52 52 57 57 57 57 57 57 57 57 57 57 43 43 39 43 43 57 57 57 52 52 52 57 59 57 52 43 50 43 52 52 52 57 57 57 57 57 57 57 57 57
57 54 54 54 57 57 52 52 52 43 43 43 43 43 57 59 57 57 57 47 47 47 57 59 57 50 48 48 46 46 39 39 43 43 44 59 59 59 44 43 43 44 44 57 54 47 47 47 57 57
43 43 43 59 47 57 47 39 37 37 37 44 44 43 43 43 43 47 59 59 57 57 47 47 35 35 35 39 42 47 40 32 30 30 37 43 43 43 37 32 37 28 30 30 39 39 48 48 48 48
34 37 30 24 24 11 11 11 11 11 12 12 9 9 12 15 25 30 37 37 33 43 43 37 37 39 39 30 35 35 39 39 48 48 37 32 28 20 20 28 31 43 43 43 43 43 42 37 34 34
33 39 43 43 43 37 28 23 19 15 12 12 12 18 21 18 18 15 8 8 6 6 6 8 10 13 28 23 25 24 28 24 24 24 23 24 24 28 26 21 14 14 18 23 19 25 25 33 33 43
43 37 28 26 14 14 21 28 23 21 14 18 18 30 40 32 32 22 26 16 12 12 24 24 42 47 43 43 43 44 44 57 57 57 57 57 57 57 43 42 42 35 35 35 35 37 37 47 47 42
37 30 30 37 37 39 39 37 37 28 28 32 37 37 37 28 28 28 28 28 15 19 16 23 19 16 19 19 21 28 20 15 21 17 21 14 15 15 32 20 28 22 22 22 29 30 39 35 35 30
30 28 28 17 18 17 11 9 9 10 10 10 13 11 11 11 15 15 30 30 46 46 43 43 47 37 26 18 13 11 13 15 18 17 15 15 15 15 18 15 10 10 10 10 16 19 28 33 31 28
22 22 22 17 17 20 20 19 19 23 22 24 12 14 14 30 30 33 33 33 28 25 27 25 22 22 28 28 28 26 14 11 10 10 12 12 19 16 24 24 26 24 18 17 10 10 10 9 15 15
10 8 8 8 10 10 10 8 8 11 15 12 12 10 10 13 26 25 15 11 9 9 9 9 10 14 14 8 8 8 10 11 10 11 11 11 11 13 13 9 9 9 12 12 13 13 26 19 21 16
10 10 10 9 9 9 9 9 10 11 15 15 12 12 15 15 19 19 15 8 8 8 8 8 9 12 13 15 12 12 9 9 8 10 14 14 16 20 19 22 22 23 23 22 18 11 11 11 18 17
19 18 18 15 19 12 8 8 6 6 6 8 10 11 11 10 10 8 6 8 8 8 10 8 9 9 8 8 8 8 10 8 9 9 8 8 8 8 8 8 23 13 8 8 8 8 8 10 10 11
11 11 8 10 8 8 8 8 8 8 10 9 9 8 8 8 8 11 8 9 8 13 13 10 10 10 14 12 15 11 8 8 8 10 10 10 8 8 8 8 8 10 6 6 8 8 10 8 8 6
6 8 12 15 8 6 6 8 6 6 6 8 10 9 9 10 10 9 8 8 8 9 9 10 12 13 15 10 10 12 12 9 9 8 8 7 6 8 7 6 8 8 9 9 9 9 9 9 9 8
11 10 8 8 8 10 8 8 8 8 8 8 8 10 8 8 8 8 8 9 10 12 12 11 11 13 10 10 10 11 11 11 10 10 9 9 9 10 10 10 10 10 10 10 11 20 18 17 11 10
9 9 10 9 9 12 10 13 10 8 8 8 8 8 8 11 8 8 8 12 22 19 10 8 8 8 8 8 8 8 10 10 9 9 10 13 13 13 11 10 10 9 8 8 10 10 8 8 8 10
8 8 9 9 10 8 8 6 6 8 8 8 8 9 10 10 8 8 8 8 10 10 9 9 8 8 8 12 9 8 8 6 8 6 6 6 6 12 10 8 8 8 8 8 8 8 8 8 10 9
9 10 10 8 8 8 6 6 6 6 8 8 10 11 11 11 11 13 10 8 6 6 8 8 8 8 8 8 10 8 6 6 6 7 6 12 10 9 9 10 10 8 8 6 6 8 8 11 6 8
6 6 8 6 6 6 6 6 8 8 8 8 12 8 8 8 11 10 10 10 9 9 9 8 11 9 8 8 8 8 10 10 10 10 9 8 8 8 6 6 8 8 14 11 13 8 8 8 8 8
8 14 17 9 8 6 7 6 7 8 10 10 10 8 7 8 7 6 8 8 11 9 9 9 10 13 15 16 10 10 8 8 8 8 8 8 8 8 6 6 8 6 8 8 8 8 11 8 10 10
10 10 9 9 9 10 10 10 10 8 8 6 6 6 6 6 6 8 11 13 11 8 6 6 8 8 7 7 11 8 8 6 6 6 8 12 8 8 8 13 13 10 10 6 7 6 6 6 6 |