Query= MSMg01no107_n01.b1 MSMg01no107_n01.b1 CHROMAT_FILE:
MSMg01no107_n01.b1 PHD_FILE: MSMg01no107_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:13 2005
(331 letters)
>mm_chr5_136943555_136944286
Length = 732
Score = 578 bits (299), Expect = e-169
Identities = 323/331 (97%), Gaps = 1/331 (0%)
Strand = Plus / Minus
Query: 1 agatcctcccaagtctgtgattcagcacattaatgctccacgagcatttgtgcttgctgc 60
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 531 agatcctcccaagtccgtgattcagcacattaatgctccacgagcacttgtgcttgctgc 472
Query: 61 gtgccattaaccttatatttctggattgatccacctcctccctggtcaagagtgctcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gtgccattaaccttatatttctggattgatccacctcctccctggtcaagagtgctcttg 412
Query: 121 aatagataaagctgtcatagctgtctcagtatgaataagatacttgtcctgttcttcaag 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 411 aatagataaagctgtcatagctgtcttagtatgaataagatacttgtcctgttcttcaag 352
Query: 181 agcagacttgtattcagaatgggataattcttgctcagagccacacagccattcagtcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agcagacttgtattcagaatgggataattcttgctcagagccacacagccattcagtcgt 292
Query: 241 gttagtgagcca-gactcatgtggaagagtccagtatttttttggtcaacaactccccct 299
|||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 291 gttagtgagccaggactcatgtggaagagtccagtatctccgtggtcaacaactccccct 232
Query: 300 gtttgttttcacactgcagatttgaaaagtc 330
|||||||||||||||||||||||||||||||
Sbjct: 231 gtttgttttcacactgcagatttgaaaagtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 732
Length adjustment: 9
Effective length of query: 322
Effective length of database: 723
Effective search space: 232806
Effective search space used: 232806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_n01.g1 MSMg01no107_n01.g1 CHROMAT_FILE:
MSMg01no107_n01.g1 PHD_FILE: MSMg01no107_n01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:13 2005
(274 letters)
>mm_chr5_136801859_136802532
Length = 674
Score = 530 bits (274), Expect = e-155
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1 ttccaggccactggccttcagtacatactgacaaagaagtgactgtcaactcatgggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccaggccactggccttcagtacatactgacaaagaagtgactgtcaactcatgggggc 260
Query: 61 tcaaatgtgttttctgtggatctccaggcttctgtgtagtttgtgtagcttctgtgtagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaatgtgttttctgtggatctccaggcttctgtgtagtttgtgtagcttctgtgtagt 320
Query: 121 tttgtgagctgggtactcatacaggagaaagttgggatgcccagcagctctgttaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtgagctgggtactcatacaggagaaagttgggatgcccagcagctctgttaaagca 380
Query: 181 cacaaacctacagagatggccttgactgtgaggctggccgctgagccctccacaaggagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacaaacctacagagatggccttgactgtgaggctggccgctgagccctccacaaggagt 440
Query: 241 gcccagcaatgccgggtgctgtgcagtcttggga 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 gcccagcaatgccgggtgctgtgcagtcttggga 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
