Query= MSMg01no107_o01.b1 MSMg01no107_o01.b1 CHROMAT_FILE:
MSMg01no107_o01.b1 PHD_FILE: MSMg01no107_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:22 2005
(340 letters)
>mm_chr5_115934063_115934800
Length = 738
Score = 584 bits (302), Expect = e-171
Identities = 330/340 (97%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 1 cacaagcctctaatccgagcatttgggaggtggagccaggaggatcacggatttggagtc 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 639 cacaagcctctaatccgagcacttgggaggtggagccaggaggatcacggatttggagtc 580
Query: 61 agacaaggctatgtcagaccctctctcagcaaacaacacaagccacaaacaaacaaacaa 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 agacaaggatatgtcagaccctctctcagcaaacaacacaagccacaaacaaacaaac-- 522
Query: 121 actacaagaacctcaaaaggcaatcattgccccaggcgtcagcagcatatccggaaccta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 actacaagaacctcaaaaggcaatcattgccccaggcgtcagcagcatatccggaacctt 462
Query: 181 aactgagctgtgcaggaaagacagcgggcaatccgtagaggagcgcccaagaatcttggc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aactgagctgagcaggaaagacagcgggcaatccgtagaggagcgcccaagaatcttggc 402
Query: 241 gtgggagacacgtatgatgctgggacttgtagttttcttccatttagatcggcttcgcgg 300
|||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 401 gtgggagacacgtaggattctgggacttgtagttttcttccaactagatcggcttcgcgg 342
Query: 301 actacatttcccaagatgcacacgtaacaagcgagtccca 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 actacatttcccaagatgcacacgtaacaagcgagtccca 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 738
Length adjustment: 9
Effective length of query: 331
Effective length of database: 729
Effective search space: 241299
Effective search space used: 241299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_o01.g1 MSMg01no107_o01.g1 CHROMAT_FILE:
MSMg01no107_o01.g1 PHD_FILE: MSMg01no107_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:22 2005
(329 letters)
>mm_chr5_115785372_115786101
Length = 730
Score = 600 bits (310), Expect = e-176
Identities = 325/330 (98%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 1 agagacatctgcaaaacgcaaatgccagagttacagtgtgagagacttgaagcttctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagacatctgcaaaacgcaaatgccagagttacagtgtgagagacttgaagcttctaga 260
Query: 61 gtacagagagacaggacccctaaggaggctgtagggggcagaacagtccttgctgtggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtacagagagacaggacccctaaggaggctgtagggggcagaacagtccttgctgtggtt 320
Query: 121 gctgtccctagttaggagtgctgtagtaaaagaccagagagctgggacagtaggtcagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgtccctagttaggagtgctgtagtaaaagaccagagagctgggacagtaggtcagta 380
Query: 181 gttcaatgactgctgcttgtatgtgaggctccgaattaaatccctaacacagaagggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttcaatgactgctgcttgtatgtgaggctccgaattaaatccctaacacagaagggaga 440
Query: 241 gaaaaaaaaaa-cccaacaaaaactgcagttgcaccactctttggtggctactggtcttt 299
||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 441 gaaaaaaaaaaacccaacaaaaactgcagttgcaccacgcaaaggtggctactggtcttt 500
Query: 300 ctgggacttagggttctgttggaggatccc 329
||||||||||||||||||||||||||||||
Sbjct: 501 ctgggacttagggttctgttggaggatccc 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 730
Length adjustment: 9
Effective length of query: 320
Effective length of database: 721
Effective search space: 230720
Effective search space used: 230720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
