Query= MSMg01no108_p06.b1 MSMg01no108_p06.b1 CHROMAT_FILE:
MSMg01no108_p06.b1 PHD_FILE: MSMg01no108_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:58 2005
(206 letters)
>mm_chr5_129359531_129360136
Length = 606
Score = 352 bits (182), Expect = e-102
Identities = 200/206 (97%)
Strand = Plus / Minus
Query: 1 tcctcctcccagtcttactgcatgggtattttatcacaggtacctttcagtcccttttag 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 406 tcctcctcccagtcttactgcatgggtattttatcacaggtacccttcagtcccttttag 347
Query: 61 gagttaagcgtcatttatgtgttcttgtgtgcagttttgggtgacaaccaatggtgttac 120
|||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 346 gagttaggcgtcatttatgtgttctcgtgtgcagttttgggtgacaaccaatggggttac 287
Query: 121 atttcccgcagggatacaattcctaagtccacaggtcatgctgaagtcgcaaggagtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atttcccgcagggatacaattcctaagtccacaggtcatgctgaagtcgcaaggagtgaa 227
Query: 181 aaattacccaggagttctcttaggca 206
|||||| ||||||||||||||||||
Sbjct: 226 aaattaatcaggagttctcttaggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 606
Length adjustment: 8
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no108_p06.g1 MSMg01no108_p06.g1 CHROMAT_FILE:
MSMg01no108_p06.g1 PHD_FILE: MSMg01no108_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:58 2005
(414 letters)
>mm_chr5_129179256_129180069
Length = 814
Score = 756 bits (391), Expect = 0.0
Identities = 408/417 (97%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 1 cttatataggtcaggttggccttgaactccccaaaggaatcagctttcctctgcctccca 60
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 195 cttatataggtcagattggccttgaactccccaaaagaatcagctttcctctgcctccca 254
Query: 61 aatcctggaattaaaggtgcataccacctggcccagctcatcatttctattcaaaacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatcctggaattaaaggtgcataccacctggcccagctcatcatttctattcaaaacccc 314
Query: 121 aatcttcagataaggaaaattaaattcagacagaattatgataatatgcatagtcagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aatcttcagataaggaaaattaaattcagacagaattatgataatatgcatagtcagctg 374
Query: 181 gctagtaagtgcttcaattcagcctttaacacaaatgtttctttttttctttttcttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gctagtaagtgcttcaattcagcctttaacacaaatgtttctttttttctttttcttctt 434
Query: 241 cttcttctt------tttttttttatcaacagtcacatttaaaaagaagctggaaaaaga 294
||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cttcttcttcttctttttttttttatcaacagtcacatttaaaaagaagctggaaaaaga 494
Query: 295 accatttggaaaatattccatttctaattgaggtaacggagcgtgaacgttttctgagag 354
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 495 accatttggaaaatattccatttctaattgaggtaacagagcgtgaacgttttctgagag 554
Query: 355 tcagtgcatttgcatggcctcaaagtacctcactgcccgcaagaaaggtcttactca 411
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tcagtgcatttgcatggcctcaaagtacctcactgcccgcaagaaaggtcttactca 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
