Query= MSMg01no110_e19.b1 MSMg01no110_e19.b1 CHROMAT_FILE:
MSMg01no110_e19.b1 PHD_FILE: MSMg01no110_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:50 2005
(624 letters)
>mm_chr5_97800252_97801275
Length = 1024
Score = 1118 bits (578), Expect = 0.0
Identities = 612/626 (97%), Gaps = 5/626 (0%)
Strand = Plus / Plus
Query: 4 ggaattccattgagtagccattccttatgcatctccgtcttcagagttgcccatttgtaa 63
|||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 199 ggaattccatcgagtaggtattccttatgcatctccgtctttagagttgcccatttgtaa 258
Query: 64 aagcagaggctcctagggaaatgcacttccttgccctcaacagctctggaaaactccttc 123
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aagcaaaggctcctagggaaatgcacttccttgccctcaacagctctggaaaactccttc 318
Query: 124 ccagcgtactgtgggtcatttcactctttgcaccagagaagctgtgctgggaaaacagta 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccagcgaactgtgggtcatttcactctttgcaccagagaagctgtgctgggaaaacagta 378
Query: 184 acagctggaacaattaagaggcaaactttatatttttaaatttactttttattgcattat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 379 acagctggaacaattaagaggcaaactttatatttttaaatttactttttattgcgttat 438
Query: 244 tttatgtttatgggtattttgcctgcatgtatgtctgtgcaccatgtgcatgcctggtac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttatgtttatgggtattttgcctgcatgtatgtctgtgcaccatgtgcatgcctggtac 498
Query: 304 ctgtggaggtcaaaaggtgtcagactcccagaactagatttagagatggttgtaaactgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctgtggaggtcaaaaggtgtcagactcccagaactagatttagagatggttgtaaactgt 558
Query: 364 taatgtgcgcgctggaaattgaacttgagtcctctggaagaacaaccagtgctcttaatc 423
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 taatgtgtgtgctggaaattgaacttgagtcctctggaagaacaaccagtgctcttaatc 618
Query: 424 accgaacc-----tctaattccaacctgccaagattttgtatgagagggttcatcccctt 478
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 accgaaccatctctctaattccaacctgccaagattttgtatgagagggttcatcccctt 678
Query: 479 aacttgtctataaacaagcagaggatgagctgtgtctgttcgctagttctgctgagacag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aacttgtctataaacaagcagaggatgagctgtgtctgttcgctagttctgctgagacag 738
Query: 539 gagatgtccagtctcccctttctagatgccacaaaacccagatatcagagctttgcataa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gagatgtccagtctcccctttctagatgccacaaaacccagatatcagagctttgcataa 798
Query: 599 atgcttttcagaggctcctcagcctt 624
||||||||||||||||||||||||||
Sbjct: 799 atgcttttcagaggctcctcagcctt 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_e19.g1 MSMg01no110_e19.g1 CHROMAT_FILE:
MSMg01no110_e19.g1 PHD_FILE: MSMg01no110_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:51 2005
(192 letters)
>mm_chr5_97931136_97931727
Length = 592
Score = 313 bits (162), Expect = 3e-90
Identities = 183/190 (96%)
Strand = Plus / Minus
Query: 3 agacttgggagaacttgttttaaatgtcagctctgggatggatggcagtgggagttttaa 62
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 392 agacttgggagaacttgttttaaatgtcagctctgggatggatgacagtgggagttttaa 333
Query: 63 taaagatgtcaggcgcactgcacatgtaagtcatcagggatgtctgttaaaatccagaat 122
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 332 taaagatgtcaggagcactgcacacgtaagtcatcagggatgtctgttaaaatccagaat 273
Query: 123 ttcctttgtgggatgggtttggggagtggagctatgcgtttccatcacgttcccgacctg 182
||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||
Sbjct: 272 ttcctttgtgggatgggtttggggagtggagctatgcttttctatcaagttcccgacctg 213
Query: 183 agctgattcc 192
|||||||||
Sbjct: 212 tgctgattcc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 592
Length adjustment: 8
Effective length of query: 184
Effective length of database: 584
Effective search space: 107456
Effective search space used: 107456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
