AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGACTTACACAGCCTTTCCAAACCATAACCAGATGCACTGAGCACTT
TTCAGAGACTTCATTTGAGTCTTGCTAAGTAGTGACTGTCTCCTCAAATC
CAGCCAGGATAGGCAAACAAATAGTTAAAGCAAATAGAATAAAACGGATA
TTGAAACAGAGTACAGAATGAGATGTGTCTACACACTGTGTGTTTGCTGT
CTTCTGCTCTTCTCTCATAAGACTTGAGCTAGGAGGTGACTATGAAGAGT
CAAACCATCTGGGCAGTGTAACCCCAGCCTCCTTTTGTCCCCTCAAAGTC
GTACAAGCAGCTAAGATCTGAGAACATGCCTAAAGGCCTCCCAACTTGCT
TGGCGACACTGCACAGGATCTTAGCCTTGGGCAGTGAGCTGGCCTTCCAT
AAACCCAAAAGCCTACCCTTTACATTGCCCTGTCACAGTCCCTCACACTG
TGACACAATATCTCCTGTTTTAAAAGGTGTTGCTTTGCTAATGGTTACAG
GAAATTGTTCATGAAGGATGAAACAATGCTTAGTCAAGTAAAAGTACCAA
ATGATGTCCGTGACCCTTCAGAGCTCATGAGAAATGAGAGGGGAAAATTA
GAATTCACAATGACCTCAGTGAGTGAGACAGTTACTCATCATACATTAAG
CCTATAAAAA

TTACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTAGGATTGTCGTTTTAGAATGAATTC
TTTTTCTTTGTGTGTGTGTGTGGGGGGGGGCCACACCAACCTTTTATCTC
AATCAAAACACCATTCTCCTGTCATGTCCCCACCCAACTCCAACAAACCT
GATTTTCCTGAACCATACTTACCACAGTTCTATAACCATTTAACCCAAAA
ATACCCATCATAAATCTTTATCACCTACCTCCACCGACATTAACCCCCTC
CCAAAACCTGATCCCTCCAATACGTCCATTAATTCTAATATCTCAAGAAA
ATTTCTTTTCTTCCCCCCCCCCCCCCCATATAAAAAAACTAATATCTTTT
CCCATATACCCACCTCAAAAAAAAACAAAAAATGTACCATAGACCCTAAT
CTATTTTTACCACCTTCATTTTTATAATCACATCCTCATTTTATACCACC
TATATTTATAATACCCCATCTTCCCCCCCATTACTAACCCTTACCAAAAT
ACTCTTTATCTCACGCCTTTTACCCATTAATCCCTTTCTTTCTTTTTTTC
TTTTCCCTTCCATCCCTATTCCTTCACTATCTCATACATTTAACCCCTTC
TTCCCCTCCTATTTCCCTCCCCTTTTCCATCTTCCTCTCTTCCTCCCCCC
CCTTCTTTTTTTTTATTTTTTATTTTTCTCCCCCCCCCTCG

Query= MSMg01no110_n10.b1 MSMg01no110_n10.b1 CHROMAT_FILE:
MSMg01no110_n10.b1 PHD_FILE: MSMg01no110_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:33 2005
         (665 letters)



>mm_chr5_151975599_151976663
          Length = 1065

 Score = 1278 bits (661), Expect = 0.0
 Identities = 661/661 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagacttacacagcctttccaaaccataaccagatgcactgagcacttttcagag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagacttacacagcctttccaaaccataaccagatgcactgagcacttttcagag 264

                                                                       
Query: 65  acttcatttgagtcttgctaagtagtgactgtctcctcaaatccagccaggataggcaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acttcatttgagtcttgctaagtagtgactgtctcctcaaatccagccaggataggcaaa 324

                                                                       
Query: 125 caaatagttaaagcaaatagaataaaacggatattgaaacagagtacagaatgagatgtg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaatagttaaagcaaatagaataaaacggatattgaaacagagtacagaatgagatgtg 384

                                                                       
Query: 185 tctacacactgtgtgtttgctgtcttctgctcttctctcataagacttgagctaggaggt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctacacactgtgtgtttgctgtcttctgctcttctctcataagacttgagctaggaggt 444

                                                                       
Query: 245 gactatgaagagtcaaaccatctgggcagtgtaaccccagcctccttttgtcccctcaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gactatgaagagtcaaaccatctgggcagtgtaaccccagcctccttttgtcccctcaaa 504

                                                                       
Query: 305 gtcgtacaagcagctaagatctgagaacatgcctaaaggcctcccaacttgcttggcgac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtcgtacaagcagctaagatctgagaacatgcctaaaggcctcccaacttgcttggcgac 564

                                                                       
Query: 365 actgcacaggatcttagccttgggcagtgagctggccttccataaacccaaaagcctacc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actgcacaggatcttagccttgggcagtgagctggccttccataaacccaaaagcctacc 624

                                                                       
Query: 425 ctttacattgccctgtcacagtccctcacactgtgacacaatatctcctgttttaaaagg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctttacattgccctgtcacagtccctcacactgtgacacaatatctcctgttttaaaagg 684

                                                                       
Query: 485 tgttgctttgctaatggttacaggaaattgttcatgaaggatgaaacaatgcttagtcaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgttgctttgctaatggttacaggaaattgttcatgaaggatgaaacaatgcttagtcaa 744

                                                                       
Query: 545 gtaaaagtaccaaatgatgtccgtgacccttcagagctcatgagaaatgagaggggaaaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gtaaaagtaccaaatgatgtccgtgacccttcagagctcatgagaaatgagaggggaaaa 804

                                                                       
Query: 605 ttagaattcacaatgacctcagtgagtgagacagttactcatcatacattaagcctataa 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttagaattcacaatgacctcagtgagtgagacagttactcatcatacattaagcctataa 864

            
Query: 665 a 665
           |
Sbjct: 865 a 865


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space:   691025
Effective search space used:   691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)