Query= MSMg01no111_d12.b1 MSMg01no111_d12.b1 CHROMAT_FILE:
MSMg01no111_d12.b1 PHD_FILE: MSMg01no111_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:15 2005
(653 letters)
>mm_chr5_107412740_107413792
Length = 1053
Score = 1216 bits (629), Expect = 0.0
Identities = 647/653 (99%)
Strand = Plus / Minus
Query: 1 ccagaaatctgtttgcctttgcctgctcatttcttgtgattaaaggcctgcaaccaccac 60
||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||
Sbjct: 919 ccagaaatctgtttgcctttgcctgctgagttcttgtgattaaaggtgtgcaaccaccac 860
Query: 61 atcaggatggagaaaaagaaataaaagttttgtattctcttccctgctcttctttggctc 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 atcaggatggaaaaaaagaaataaaagttttgtattctcttccctgctcttctttggctc 800
Query: 121 tccatgttcaagtaacctgggcagactatcaacatataccacatgcgcctggcttaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tccatgttcaagtaacctgggcagactatcaacatataccacatgcgcctggcttaactt 740
Query: 181 attactctttaaataagtattctgatataagcatctaaaagtttattattaaatacatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 attactctttaaataagtattctgatataagcatctaaaagtttattattaaatacatat 680
Query: 241 cccaaaacattcaagttttaaaaaaattacagcataagacaaagtgtgtatacacacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cccaaaacattcaagttttaaaaaaattacagcataagacaaagtgtgtatacacacaaa 620
Query: 301 tatacattatatacacatggcaaattgatcaatgagacacactgatctatccatgttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tatacattatatacacatggcaaattgatcaatgagacacactgatctatccatgttcac 560
Query: 361 aacagtaaacactctgagagacagctccctagtctgtgatgatacaagcaggaactcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aacagtaaacactctgagagacagctccctagtctgtgatgatacaagcaggaactcctc 500
Query: 421 agcaagtccatcctgactcctggaagcctggtatgctatctcggacagagagaagtttag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agcaagtccatcctgactcctggaagcctggtatgctatctcggacagagagaagtttag 440
Query: 481 aacaaaataatgcacaaatctctgtatcgagccctctactactttgtccccttatctttt 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 439 aacaaaataatgcacaaatctccgtatcgagccctctactactttgtccccttatctttt 380
Query: 541 tctcaattacctaagacccattccctctgaccaagattaattcagaacagaaatgcagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctcaattacctaagacccattccctctgaccaagattaattcagaacagaaatgcagaa 320
Query: 601 atgtggatgctcctggcaaaccagaaaacatcgccagtaatgtccagttctat 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atgtggatgctcctggcaaaccagaaaacatcgccagtaatgtccagttctat 267
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_d12.g1 MSMg01no111_d12.g1 CHROMAT_FILE:
MSMg01no111_d12.g1 PHD_FILE: MSMg01no111_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:15 2005
(305 letters)
>mm_chr5_107228835_107229540
Length = 706
Score = 553 bits (286), Expect = e-162
Identities = 301/306 (98%), Gaps = 1/306 (0%)
Strand = Plus / Plus
Query: 1 cttttgggttttgttattgttggttttttgagatagaatttctcagtgtaatcagccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttgggttttgttattgttggttttttgagatagaatttctcagtgtaatcagccctg 260
Query: 61 gctgtcagtttgtactccaggctggccttgaactcgcagagatctgcctgcctctgcctg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gctgtcagtttgtactccaggctggccttgaactcgcagagatccgcctgcctctgcctg 320
Query: 121 ctgagtgctgagattaaaggtgtggccaccacatccggctttggttgacctgacttttga 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgagtgctgggattaaaggtgtggccaccacatccggctttggttgacctgacttttga 380
Query: 181 ggtgatttgtgagaaaagtgatttttaaaaaggatggaagaaaaaaaaa-ccatccacga 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ggtgatttgtgagaaaagtgatttttaaaaaggatggaagaaaaaaaaaaccatccacga 440
Query: 240 aagcaaaacacgaggatagccagaaagtggatgtgtgtttttgtgtgtgtgtgtgtgtgt 299
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 441 aagcaaaacacgaggatagccagaaagtggatgtgtgtgtatgtgtgtgtgtgtgtgtgt 500
Query: 300 gtgtgt 305
||||||
Sbjct: 501 gtgtgt 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 706
Length adjustment: 9
Effective length of query: 296
Effective length of database: 697
Effective search space: 206312
Effective search space used: 206312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
