TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCGGAATT
CGTTGAGGTTACAAAACGTAGAACAGACAAAATCTGTGCGGTCTATGGAC
TGTTTAGATGCCATCTTCTAACTGAGATTTGTACTTTTTGTCTTGTGTCT
TTCGTTCGGAATACGATAGCTCAGTTGATTTCATACGTTAAATAACAGCT
TCGCTTATTACGTGCATCTCTTGTATCGATCGGCACGATTTTATTCCACA
CAAATGTTACGCGCGCGCTAACGCGGGGATTCTATTACGATAAAACTGTA
TCCCCCCCACCCCCCCGCACGTATTTTAGCATTGACGGAGGAATTGGAAA
TAAGCAACCCTAGCGATTTAATTATTTCTTCAAACGTATTCGTGGAGACC
ATGTTATAAATGCCGATGGGTACGGCAAAATGGAGATATCGATATTTGGG
GACCCGTTTGTTTGGCGATTTTAAATGTAAAGTGAAGACATGAATCGCCC
AGACACTCAGCTTTTTTATATTGTTTCTCTAAGAAAAGACTAGAGGCATC
AACCGACTGGCGTTTTCGCGAGCCGTTATACCCAAACCAAAATTTCACCT
GATACTTGCCTGTTATGAAACTGGATGAGATGATATGTTCGAGACGACAC
CTTCACGGCGGTATAGAGATCTATCCGCTTGTTTGTTAACGACGACCCCC
TGCCGGTTTTTCGTCAACAAATGAAATAGCGACAGCCCCGCGGGCGAGAT
ACCCGCGTAGATTTTAGTGGTGGGACCGTATAATATTACATTGTCGCGGC
TTGTGATAAAATACCCGCGTATAACATGGAGGGCGCGGATTGTTTTATAA
CGCGGGGCGTATAATAAAACAAAAAAACAGGACGGGGAGGGGGCGAGTGA
GTGATACGAAACACAAAN

ATGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTAATTAGCTGGGATGGGAATCACAGCATGAGGCT
AAATCATTGGTTTGATGCTAAGAGTGGTTATACTGAACTGTGTCATTAAG
ATTGCATAGCACCATTGTGATAAAACAACTGTTAAACATATTACCCACCT
CAGAATTTCCTAAACAGCACTTTACAGTTTATAGAGAGATGTAAAAATAT
AGATATATATTGTAGTGTTCCACTTTGTTGGACTCCTTAATGAATGTAAC
AGTTTTTATGCTTAGTAGAAAATCTGGATTGATCATTTAAAGTCTGTTTT
CCTTTTAGATTGTGGAGTAGGGGGTTCACTTTCAGACACCTAATAAATCA
CGATCTAACATCTGAGAAAGAGACTTATTGCCACATTGCTAAATCAAGGG
GAAAAAAAAAACTCCTGGATGGTGAGCCTGCTTTGCTAAGTTCTGAGCAC
AGGACAGTAATGAGCCAGGAAGCTGTATTCTTCAGTAATAATATGTTACA
CTCCATTAATGATATGTTAGTGCCTCCATCTTATTATGTGAGGTTAGCAA
TGGTTTGTGTTTGAAAATGTTAATCTTCCCTCGTTTGTAGCTCACCAAGG
AATACAGCCATATGCAGCACTTTTCTATTTCAGGCAAGGCCTTCACTGTT
GGATAGATG

Query= MSMg01no113_o02.g1 MSMg01no113_o02.g1 CHROMAT_FILE:
MSMg01no113_o02.g1 PHD_FILE: MSMg01no113_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:26 2005
         (615 letters)



>mm_chr5_13058878_13059893
          Length = 1016

 Score = 1160 bits (600), Expect = 0.0
 Identities = 612/616 (99%), Gaps = 1/616 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   taattagctgggatgggaatcacagcatgaggctaaatcattggtttgatgctaagagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 taattagctgggatgggaatcacagcatgaggctaaatcattggtttgatgctaagagtg 757

                                                                       
Query: 61  gttatactgaactgtgtcattaagattgcatagcaccattgtgataaaacaactgttaaa 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gttatactgaactgtatcattaagattgcatagcaccattgtgataaaacaactgttaaa 697

                                                                       
Query: 121 catattacccacctcagaatttcctaaacagcactttacagtttatagagagatgtaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 catattacccacctcagaatttcctaaacagcactttacagtttatagagagatgtaaaa 637

                                                                       
Query: 181 atatagatatatattgtagtgttccactttgttggactccttaatgaatgtaacagtttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 636 atatagatatatattgtagtgttccactttgttggactccttaatgaatttagcagtttt 577

                                                                       
Query: 241 tatgcttagtagaaaatctggattgatcatttaaagtctgttttccttttagattgtgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tatgcttagtagaaaatctggattgatcatttaaagtctgttttccttttagattgtgga 517

                                                                       
Query: 301 gtagggggttcactttcagacacctaataaatcacgatctaacatctgagaaagagactt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gtagggggttcactttcagacacctaataaatcacgatctaacatctgagaaagagactt 457

                                                                       
Query: 361 attgccacattgctaaatcaagggg-aaaaaaaaaactcctggatggtgagcctgctttg 419
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 456 attgccacattgctaaatcaaggggaaaaaaaaaaactcctggatggtgagcctgctttg 397

                                                                       
Query: 420 ctaagttctgagcacaggacagtaatgagccaggaagctgtattcttcagtaataatatg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctaagttctgagcacaggacagtaatgagccaggaagctgtattcttcagtaataatatg 337

                                                                       
Query: 480 ttacactccattaatgatatgttagtgcctccatcttattatgtgaggttagcaatggtt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttacactccattaatgatatgttagtgcctccatcttattatgtgaggttagcaatggtt 277

                                                                       
Query: 540 tgtgtttgaaaatgttaatcttccctcgtttgtagctcaccaaggaatacagccatatgc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgtgtttgaaaatgttaatcttccctcgtttgtagctcaccaaggaatacagccatatgc 217

                           
Query: 600 agcacttttctatttc 615
           ||||||||||||||||
Sbjct: 216 agcacttttctatttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1016
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1006
Effective search space:   608630
Effective search space used:   608630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)