TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCATGTCTTCAGCTCTTACATGTCAATTCAGTGTATTTGCCAATTGCC
AGTTCGGGTCCTCAGTTCACTGCCTAGCAGTGCTTTTGAAGGTTATTGTT
ACAACCAAGATGGTCTCTGAAAATCAAACAGAAATGAATCATTTTTCCTC
TGTGTACTGCAGCCAGTTAAAATAGTACTGTATGCAGAAAGCACTAAATA
TGTAAATCATATTTTCCTTTTCCTTTATGACTGCTCAGATCATTTTTTTT
GGACACACACATAATCAAATACAAAGACGTGCAGCTGCCGACTGCAGAGG
AGAGATAGCAAAAAATGAATCCATTTTCTTTCTGTGTCTGGTAAGCTAGC
AATTGAATGGCAGGACTCCAATAAATATATATACACACAATTCCCCTTCT
GGCTTGAGCGATTGAATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTTC
CTCTCTCTCTCTCTCATCTCTCTCTCACACACACACCCACCCACATAGAA
TGCATACACACAAACACACAACCTTATGTTTATGCAACATGAATGAGTCC
ATCTATCTACATGCATACTACATATTGATGACCAAGGGCTCCGATTGGAT
GCTGG

CAATTTTCTNNCCNTTTCCNNNNNNNNCCNNTACNNNNNNNNCCTTNNNN
NNTTTTAATATAAAAGTAAAATTTCGGCCCCCTGCCTTCTAAAATAATTT
AAATATAAAAAAATAACCCCAAAACCCAAATTTTTTAAAATATATTATTA
AAAAAANNTTNAAAANTTTTAAAAAAATTTTTTTTTTTTATAAAAAAAAA
AATAAAATATATTTTTTGTATATTATTTTATTATAACNNNATTATATGAG
ATTNNNANNTAAATTAAAGAATTANTAATAATTTNAATAATTATGAAAAA
AATAATTCTATTAGAAAAATCATGATGCTTAATTGTTCTTGATTCGTTAC
TAGAATTTATTGAGATTTTTTCTAAATTAAAAAAAANATGGNTAAATTTT
AACCTTTCTTTGTTTTTTCGGGNNAAANANNAAAAAAAAACGTATAANCC
TNNTTCNNTTCNNAAATATTTTTATTTTTTTTTTAAAATATTCAAACTAA
AAATTTTTAATTGTAATTTATATAAATTTTTTATTTTTTGTAAAATAAAC
ATTTTTATTTATATTATGGGAATAATAATGTAAATAGTGGGAGATGGGGG
GGGGGGGGGGCAGAATATATAAAAAAGAAAAAATANTNTNNNNCNNNNCN
AAANNTATTAAAATCTTTTTTTATTTTTTTTTTTATTTTTAACCCCCCCC
NCNCCCNTNCACTCTACTTTTTTTATATATATATTTATATATCCTCATAT
AAATTTTATAACCCCCCCNCACACTTCATTTTTATTATTTTTTTAATTTT
AAANAAAATACCTAAATAAACATCTAANAATATTCTCCTTCACCTCTTAA
TTCCACCAAATATAATCAATATCTTATTAACCCAATTTATATCACAATTT
TTTATTTTATTAAATTTTTTG

Query= MSMg01no114_b08.b1 MSMg01no114_b08.b1 CHROMAT_FILE:
MSMg01no114_b08.b1 PHD_FILE: MSMg01no114_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:41 2005
         (577 letters)



>mm_chr5_4893172_4894148
          Length = 977

 Score =  980 bits (507), Expect = 0.0
 Identities = 552/573 (96%), Gaps = 18/573 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccatgtcttcagctcttacatgtcaattcagtgtatttgccaattgccagttcgg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatgtcttcagctcttacatgtcaattcagtgtatttgccaattgccagttcgg 264

                                                                       
Query: 65  gtcctcagttcactgcctagcagtgcttttgaaggttattgttacaaccaagatggtctc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtcctcagttcactgcctagcagtgcttttgaaggttattgttacaaccaagatggtctc 324

                                                                       
Query: 125 tgaaaatcaaacagaaatgaatcatttttcctctgtgtactgcagccagttaaaatagta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaaaatcaaacagaaatgaatcatttttcctctgtgtactgcagccagttaaaatagta 384

                                                                       
Query: 185 ctgtatgcagaaagcactaaatatgtaaatcatattttccttttcctttatgactgctca 244
           |||||||||||||||||||||||||||||||||||||||||||      |||||||||||
Sbjct: 385 ctgtatgcagaaagcactaaatatgtaaatcatattttccttt------atgactgctca 438

                                                                       
Query: 245 gatcattttttttggacacacacataatcaaatacaaagacgtgcagctgccgactgcag 304
           |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 439 gatcattttttt-ggacacacacataatcaaatacaaagacgcgcagctgccgactgcag 497

                                                                       
Query: 305 aggagagatagcaaaaaatgaatccattttctttctgtgtctggtaagctagcaattgaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aggagagatagcaaaaaatgaatccattttctttctgtgtctggtaagctagcaattgaa 557

                                                                       
Query: 365 tggcaggactccaataaatatatatacacacaattccccttctggcttgagcgattgaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tggcaggactccaataaatatatatacacacaattccccttctggcttgagcgattgaat 617

                                                                       
Query: 425 cctctctctctctctctctctctctctctctctctctctctctctctctctctctctctc 484
           |||||||||||||||||||||||||||||||| |||||| | || |||||||||||| ||
Sbjct: 618 cctctctctctctctctctctctctctctctc-ctctcttt-tc-ctctctctctct-tc 673

                                                                       
Query: 485 tctctctccctctctctctcttcctctctctctctctcatctctctctcacacacacacc 544
            |||||||  |||||||||||    |||||||||||||||||||||||||||||||||||
Sbjct: 674 -ctctctc--tctctctctct----ctctctctctctcatctctctctcacacacacacc 726

                                            
Query: 545 cacccacatagaatgcatacacacaaacacaca 577
           |||||||| ||||||||||||||||||||||||
Sbjct: 727 cacccacacagaatgcatacacacaaacacaca 759


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 104
Number of extensions: 46
Number of successful extensions: 46
Number of sequences better than 10.0: 1
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space:   548289
Effective search space used:   548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)