Query= MSMg01no117_i12.b1 MSMg01no117_i12.b1 CHROMAT_FILE:
MSMg01no117_i12.b1 PHD_FILE: MSMg01no117_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:07 2005
(567 letters)
>mm_chr5_65391337_65392303
Length = 967
Score = 963 bits (498), Expect = 0.0
Identities = 510/514 (99%)
Strand = Plus / Minus
Query: 1 gaatgtagttttttagaaaaagatacatcgaagctgccatgctcaaataagcaaactaaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 514 gaatgtagttttttagaaaaagatacatcgaggctgccatgctcaaataagcaaactaaa 455
Query: 61 tgcagctttaaaaggtgacaatcaactttctttctggaaaagtcttcgctctccaaaacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tgcagctttaaaaggtgacaatcaactttctttctggaaaagtcttcgctctccaaaacg 395
Query: 121 atgggcaaatttctctgtggtcaatgttcaatataccctaccctagggtcagggataaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atgggcaaatttctctgtggtcaatgttcaatataccctaccctagggtcagggataaga 335
Query: 181 ataagtgctactgagctgacaatgtttgcatcaaagcccaccagaaatccatcagtcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ataagtgctactgagctgacaatgtttgcatcaaagcccaccagaaatccatcagtcttg 275
Query: 241 ttcctgatacagagatttcaaagcactgtgggaaactgtagcatcaatagcatcatcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttcctgatacagagatttcaaagcactgtgggaaactgtagcatcaatagcatcatcctt 215
Query: 301 ttcatggatgaaccgtgatggctattcttggttgtcaactcaactacatctggaaccaac 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 214 ttcatggatgaaccgtgatggctattcttggttatcaactcaactacatctggaaccaac 155
Query: 361 taaacccaaatggctgagcccacctgtgagatacttttttttcaattaaaccctttgaaa 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 154 taaacccaaatggctgagcccacctgtgagatacttttttctcaattaaaccctttgaaa 95
Query: 421 tgggaggcccacttctaatccggatcttttgtagtaggaagatccatctttcatctgggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tgggaggcccacttctaatccggatcttttgtagtaggaagatccatctttcatctgggc 35
Query: 481 cacacttcctgcaggtagtctatataaaggacat 514
||||||| ||||||||||||||||||||||||||
Sbjct: 34 cacactttctgcaggtagtctatataaaggacat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_i12.g1 MSMg01no117_i12.g1 CHROMAT_FILE:
MSMg01no117_i12.g1 PHD_FILE: MSMg01no117_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:07 2005
(451 letters)
>mm_chr5_65203516_65204367
Length = 852
Score = 810 bits (419), Expect = 0.0
Identities = 443/451 (98%), Gaps = 1/451 (0%)
Strand = Plus / Plus
Query: 2 gttcaggtcaacagtggaagagtgaggtgggtgagtccttgggtggtgtgaaaagtgggc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gttcaggtcaacagtggaagagtgaggtgggtgagtccttgggtggtgtgaaaagtgggc 261
Query: 62 acccttccaaggtaggtgccagccccgctaagcaagcctggcttagggtgcctgcccctc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acccttccaaggtaggtgccagccccgctaagcaagcctggcttagggtgcctgcccctc 321
Query: 122 tgcgtttctggtcaagccattgcatggtacttcctgtagtactggtcacagggagcgctc 181
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 322 tgcgtttctggtcaggccattgcatggtacttcctgtagtaccggtcacagggagcgctc 381
Query: 182 agaaagtttgctaaggaaatgtaaagaaagggttctcgacaaaggaagttcagctccagg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agaaagtttgctaaggaaatgtaaagaaagggttctcgacaaaggaagttcagctccagg 441
Query: 242 gactgctcttgccctcctggccaagatccacagcaagctcagatctttaccctgtcagtt 301
||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 442 gacggcgcttgccctcctggccaagatccacagcgagctcagatctttaccctgtcagtt 501
Query: 302 cctttggagagtgagggtggggactagcaacatacttacttcctcttttgaaaattcgct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cctttggagagtgagggtggggactagcaacatacttacttcctcttttgaaaattcgct 561
Query: 362 tgggagcgtgaagaaggtgctcgcgattgttgcttgttgggttgtcta-gtaatctgttc 420
||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||
Sbjct: 562 tgggagcgtgaagaaggtgctggcgattgttgcttgttgggttgtctaagtagtctgttc 621
Query: 421 tctggacacctggctgaggttcccctttgaa 451
|||||||||||||||||||||||||||||||
Sbjct: 622 tctggacacctggctgaggttcccctttgaa 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
