Query= MSMg01no118_b08.b1 MSMg01no118_b08.b1 CHROMAT_FILE:
MSMg01no118_b08.b1 PHD_FILE: MSMg01no118_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:49 2005
(397 letters)
>mm_chr5_83436305_83437103
Length = 799
Score = 745 bits (385), Expect = 0.0
Identities = 395/399 (98%), Gaps = 2/399 (0%)
Strand = Plus / Plus
Query: 1 cagagatgcatgcttcacggcacagatgatattgaattctgcacttgctatagatatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagatgcatgcttcacggcacagatgatattgaattctgcacttgctatagatatttg 260
Query: 61 ttatatcccctctatttatctgactgaaactgtattttccttgcaggtatcttgtacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatatcccctctatttatctgactgaaactgtattttccttgcaggtatcttgtacaaa 320
Query: 121 gctcaattattaacacgagatatttcactactaatgactcattttaaaattagatatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcaattattaacacgagatatttcactactaatgactcattttaaaattagatatgaa 380
Query: 181 cctatgcttctgcacttagaatttaaaaaaaaa--tctcagcatcacgttaagtgttatt 238
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 cctatgcttctgcacttagaatttaaaaaaaaaaatctcagcatcacgttaagtgttatt 440
Query: 239 acaaaaataagtaacctgtagatttttctataggtctttctccacagatttaagtttcct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaaaaataagtaacctgtagatttttctataggtctttctccacagatttaagtttcct 500
Query: 299 tgccttaaatcgacagtattttactttttcatctcagaagcaagcgtactttgagtaaag 358
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 501 tgccttaaatcgacagtattttagtttttcatctcagaagcaagtgtactttgagtaaag 560
Query: 359 acaggagtgtcgactaaatctttgactacttgagtgtag 397
|||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaggagtgtcgactaaatctttgactacttgagtgtag 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 799
Length adjustment: 9
Effective length of query: 388
Effective length of database: 790
Effective search space: 306520
Effective search space used: 306520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_b08.g1 MSMg01no118_b08.g1 CHROMAT_FILE:
MSMg01no118_b08.g1 PHD_FILE: MSMg01no118_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:49 2005
(256 letters)
>mm_chr5_83533216_83533871
Length = 656
Score = 468 bits (242), Expect = e-136
Identities = 251/254 (98%)
Strand = Plus / Minus
Query: 1 aatacatattttctaatttattactacgcattttaaattctttgaacactgattctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aatacatattttctaatttattactacgcattttaaattctttgaacactgattctctgc 395
Query: 61 atttcactggatctgtactagcttcctctttcagactctaatttcattaatttcagcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atttcactggatctgtactagcttcctctttcagactctaatttcattaatttcagcatt 335
Query: 121 tctcctcttcctgacagatttgctataagcttcttaatcttgtttatgtttccatagcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tctcctcttcctgacagatttgctataagcttcttaatcttgtttatgtttccatagcac 275
Query: 181 tgagtttgtgatcatttttatgtattccatgttcagcctccatttagttattttttcata 240
|||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 274 tgagtttgtgatcacttttaggtattccatgctcagcctccatttagttattttttcata 215
Query: 241 gctagcatttcttg 254
||||||||||||||
Sbjct: 214 gctagcatttcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 656
Length adjustment: 9
Effective length of query: 247
Effective length of database: 647
Effective search space: 159809
Effective search space used: 159809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
