Query= MSMg01no118_j18.b1 MSMg01no118_j18.b1 CHROMAT_FILE:
MSMg01no118_j18.b1 PHD_FILE: MSMg01no118_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:31 2005
(372 letters)
>mm_chr5_123299199_123299968
Length = 770
Score = 658 bits (340), Expect = 0.0
Identities = 362/372 (97%), Gaps = 8/372 (2%)
Strand = Plus / Plus
Query: 4 gaattctttgaaag--tt---tcgtacttgggtaaatttgaa-attacatcaattggacg 57
|||||||||||||| || | ||||||||||||||||||| |||||||||||||||||
Sbjct: 198 gaattctttgaaagggttagttagtacttgggtaaatttgaacattacatcaattggacg 257
Query: 58 cagttgtggtggaacacatctttaatctcaagcactcggaaggcagagaggcaggcatga 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cagttgtggtggaacacatctttaatctcaagcactcggaaggcagagaggcaggcatga 317
Query: 118 tttctctgagttccaagccagcctggtgtaaactgggagttctctggccagcacagccag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tttctctgagttccaagccagcctggtgtaaactgggagttctctggccagcacagccag 377
Query: 178 gaaaaaatcttgtctaaaaagaaaaccgcacatacacacacatacgaaccgaacgacaaa 237
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 378 gaaaaaatcttgtctaaaaagaaaaccgcaca--cacacacatacgaaccgaacgacaaa 435
Query: 238 gaattcgaattggacagcctttggttcttcagccgttctcagtacatcttctaaatggct 297
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaattggaattggacagcctttggttcttcagccgttctcagtacatcttctaaatggct 495
Query: 298 cgccctagatcgtgctgcccctcttccttgaggagatccgaggttctcctggtgatgaga 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cgccctagatcgtgctgcccctcttccttgaggagatccgaggttctcctggtgatgaga 555
Query: 358 tctagaacattc 369
||||||||||||
Sbjct: 556 tctagaacattc 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 770
Length adjustment: 9
Effective length of query: 363
Effective length of database: 761
Effective search space: 276243
Effective search space used: 276243
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_j18.g1 MSMg01no118_j18.g1 CHROMAT_FILE:
MSMg01no118_j18.g1 PHD_FILE: MSMg01no118_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:31 2005
(154 letters)
>mm_chr5_123459842_123460395
Length = 554
Score = 284 bits (147), Expect = 1e-81
Identities = 150/151 (99%)
Strand = Plus / Minus
Query: 1 tcattcatcagaaatagggaaaatcacagactgtcgggtgaggtacacctggatttagac 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 351 tcattcatcagaaatagggaaaatcacagactgtcgggcgaggtacacctggatttagac 292
Query: 61 tccagtctcatggatgtgtaactcggctacgttggcagacatcccaagctgtctggactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tccagtctcatggatgtgtaactcggctacgttggcagacatcccaagctgtctggactc 232
Query: 121 catctgtcaagtgggagtcccggtggcacca 151
|||||||||||||||||||||||||||||||
Sbjct: 231 catctgtcaagtgggagtcccggtggcacca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 154
Length of database: 554
Length adjustment: 8
Effective length of query: 146
Effective length of database: 546
Effective search space: 79716
Effective search space used: 79716
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
