Query= MSMg01no119_a12.b1 MSMg01no119_a12.b1 CHROMAT_FILE:
MSMg01no119_a12.b1 PHD_FILE: MSMg01no119_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:03 2005
(376 letters)
>mm_chr5_9718593_9719368
Length = 776
Score = 719 bits (372), Expect = 0.0
Identities = 375/376 (99%)
Strand = Plus / Minus
Query: 1 cctacaggccaaaacatcatctacccttaaacagaacccttcctaaaaacaaggaaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cctacaggccaaaacatcatctacccttaaacagaacccttcctaaaaacaaggaaatat 517
Query: 61 cgtggaagaaatagtctgaaacattatttataattaaatatgtctaaagaaaatcagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cgtggaagaaatagtctgaaacattatttataattaaatatgtctaaagaaaatcagaga 457
Query: 121 ataagaacattatagaaagatgataaatttgttaacaacctgaggaataaatagaagctc 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 456 ataagaacattatagaaagatgataaatttgttaacaacctgagaaataaatagaagctc 397
Query: 181 tgaaaatgtgaaagaaataaattttctggagctgacttcaaagaacatcacaatctctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgaaaatgtgaaagaaataaattttctggagctgacttcaaagaacatcacaatctctca 337
Query: 241 aaaataaatacagtcacaagaatacagactctgaaggaacagcttttttttgcttggtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aaaataaatacagtcacaagaatacagactctgaaggaacagcttttttttgcttggtaa 277
Query: 301 gtctaaatgttcctgtgtctcttctcttacaatttaattatttcccactaggtaaacaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtctaaatgttcctgtgtctcttctcttacaatttaattatttcccactaggtaaacaag 217
Query: 361 ctgaaaaaggttctgt 376
||||||||||||||||
Sbjct: 216 ctgaaaaaggttctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_a12.g1 MSMg01no119_a12.g1 CHROMAT_FILE:
MSMg01no119_a12.g1 PHD_FILE: MSMg01no119_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:03 2005
(347 letters)
>mm_chr5_9578416_9579162
Length = 747
Score = 640 bits (331), Expect = 0.0
Identities = 343/347 (98%)
Strand = Plus / Plus
Query: 1 tttttagaatttttataacattggcttctgaatctgtgctcatataatcaagggaacaat 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tttttagaatttttataacattggcttctgaatctgtgctcatataataaagggaacaat 260
Query: 61 ggcaactggcttttatgtggacctatgcttagttacaaaattccagatggaaggaggcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcaactggcttttatgtggacctatgcttagttacaaaattccagatggaaggaggcaa 320
Query: 121 cagacatttcctagaaagatgctatttgtaggcctgagctatacacatttgaaaaaggaa 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagacatttccaagaaagatgctatttgtaggcctgagctatacacatttgaaaaaggaa 380
Query: 181 gctttgctgctgtctctggagatctggagcctagcataataatctcggtagctttgcctt 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctttgctgctgtctctggggatctggagcctagcataataatctcggtagctttgcctt 440
Query: 241 ttgttctgtgctgttcaaagtccatatctctttggggctgttttctaagaataagcctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgttctgtgctgttcaaagtccatatctctttggggctgttttctaagaataagcctat 500
Query: 301 atctttaattgttctgtaatgcatgcatagctgaatttttatttagt 347
||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 atctttaattgttctgtaatgcatgcagagctgaatttttatttagt 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
