Query= MSMg01no119_d10.b1 MSMg01no119_d10.b1 CHROMAT_FILE:
MSMg01no119_d10.b1 PHD_FILE: MSMg01no119_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:17 2005
(490 letters)
>mm_chr5_122053692_122054579
Length = 888
Score = 853 bits (441), Expect = 0.0
Identities = 478/491 (97%), Gaps = 4/491 (0%)
Strand = Plus / Minus
Query: 1 acagagctcacagggcggtgtccatgcctggaatctgcatctctgctttgcatgtacttt 60
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 493 acagagctcacagggcagtgtccatgcctggaatctgcatctctgttttgcatgtacttt 434
Query: 61 acatggcttcagctggctttcagagtgggatgggcacctctctgtctaggtggccagaag 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 acatggcttcagctggcttccagagtgggatgggcacctctctgtctaggtggccagaag 374
Query: 121 ccaagagcaggttttatggtggctgagggcaaggttctcaaccccagaggattgtggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ccaagagcaggttttatggtggctgagggcaaggttctcaaccccagaggattgtggcag 314
Query: 181 ccaggaaccatttgtgttcccagcacattccg-aggttagatcatgcccggcctgtttgt 239
|||||||||||| ||||||||||||| || | |||||||||||||| |||||||||||
Sbjct: 313 ccaggaaccatt--tgttcccagcaca-tctgaaggttagatcatgcatggcctgtttgt 257
Query: 240 gcccctggggtcacagcaactgaccctgtgcataacagcttccttggtcagtatgtccag 299
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 256 gcccctggggtcacagcaactgaccctgtgcataacagcttccttggtcaatatgtccag 197
Query: 300 gcatggtatcttatgcctttaattctagcactcgtgagctgaggcaggaggattgctgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gcatggtatcttatgcctttaattctagcactcgtgagctgaggcaggaggattgctgaa 137
Query: 360 actttcagactagagtatgacactgtctcaaatagaagtcattggccatgagccccttaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 actttcagactagagtatgacactgtctcaaatagaagtcattggccatgagccccttaa 77
Query: 420 aggctggggactctgctactaccatggcagcagagtgaggatctgcaggagggtcagtta 479
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 76 aggctagggactctgctactaccatggcagcagagtgaggatctgcaggagggtcagtca 17
Query: 480 ggggtgaccaa 490
|||||||||||
Sbjct: 16 ggggtgaccaa 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 888
Length adjustment: 10
Effective length of query: 480
Effective length of database: 878
Effective search space: 421440
Effective search space used: 421440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_d10.g1 MSMg01no119_d10.g1 CHROMAT_FILE:
MSMg01no119_d10.g1 PHD_FILE: MSMg01no119_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:17 2005
(415 letters)
>mm_chr5_121884213_121885027
Length = 815
Score = 760 bits (393), Expect = 0.0
Identities = 408/413 (98%)
Strand = Plus / Plus
Query: 3 ggaattcagcccacaccttacaaagggtaaaggtgtcctgtgccattgagctgagcccca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcagcccacaccttacaaagggtaaaggtgtcctgtgccattgagctgagcccca 262
Query: 63 gtgcagtcctgcgctcgtgtacttgtatggagagatcggaggctctgggagccgggggac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtgcagtcctgcgctcgtgtacttgtatggagagatcggaggctctgggagccgggggac 322
Query: 123 tcctgcgtgtctgagtaacttggcacttttaccacctaccccgattgtctggcgtctgaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcctgcgtgtctgagtaacttggcacttttaccacctaccccgattgtctggcgtctgaa 382
Query: 183 ctttttgtatcattcatcttttaatcctcagagcacacactcctcgtggggaaaggacct 242
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cgttttgtatcattcatcttttaatcctcagagcacacactcctcgtggggaaaggacct 442
Query: 243 gtaggttttgctgccgtgcacagccttctgttgtgaggcaggtggtaatcagaggcttgc 302
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtaggtaaggctgccgtgcacagccttctgttgtgaggcaggtggtaatcagaggcttgc 502
Query: 303 actgagccaggtgaaggcaggacctgtactgaggtatcctgataggggaaaccaaaggct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actgagccaggtgaaggcaggacctgtactgaggtatcctgataggggaaaccaaaggct 562
Query: 363 caaagctttggaggtagcaggctgagtaaaatggacgctctgggaatgtttct 415
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 563 caaagctttggaggcagcaggctgagtaaaatggacgctctgggaatgtttct 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
