Query= MSMg01no120_g23.b1 MSMg01no120_g23.b1 CHROMAT_FILE:
MSMg01no120_g23.b1 PHD_FILE: MSMg01no120_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:52 2005
(324 letters)
>mm_chr5_152001544_152002267
Length = 724
Score = 559 bits (289), Expect = e-164
Identities = 313/321 (97%), Gaps = 2/321 (0%)
Strand = Plus / Minus
Query: 5 ggaattctgcccaggagggtttctaagtagcaagcctttgataaaag-aaactagggagg 63
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 398 ggaattctgcccaggagggtttctaagtagcaagcctttgataaaagcaaactagggagg 339
Query: 64 aaacaccacaattgttctttaccagtaactatttaaaagtatttgattataaatggatac 123
|||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 338 aaacaccacaattgttctttaccagtaactgttt-aaagtatttaattataaatggatac 280
Query: 124 tatgtggtaggtttgtgattaataagattcttgttcttatgtgctcgttaaaggaaaagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tatgtggtaggtttgtgattaataagattcttgttcttatgtgctcgttaaaggaaaagg 220
Query: 184 tgaaagatgaacatcatcttgtgtattgtatggatgcctcacctgtcaatgaaaaagccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tgaaagatgaacatcatcttgtgtattgtatggatgcctcacctgtcaatgaaaaagccc 160
Query: 244 atgacctatggcttacgcagaaaatagaggtgggacattgttaggagaaagcattctggg 303
||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 159 atggcctatggcttaggcagaaaatagaggtgggacattgggaggagaaagcattctggg 100
Query: 304 agagaagggagaggagcctga 324
|||||||||||||||||||||
Sbjct: 99 agagaagggagaggagcctga 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_g23.g1 MSMg01no120_g23.g1 CHROMAT_FILE:
MSMg01no120_g23.g1 PHD_FILE: MSMg01no120_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:52 2005
(276 letters)
>mm_chr5_151862107_151862782
Length = 676
Score = 511 bits (264), Expect = e-149
Identities = 270/272 (99%)
Strand = Plus / Plus
Query: 5 gaattcaacctttcctacatcattcatagtctgtggcactctagatgtggcccttgccta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacctttcctacatcattcatagtctgtggcactctagatgtggcccttgccta 264
Query: 65 cgtgtcatttctgttaaacaccatgattcacgttggaaaactgtctttgtggctctctgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgtgtcatttctgttaaacaccatgattcacgttggaaaactgtctttgtggctctctgt 324
Query: 125 tttcaagttgggggtggtgggcaagttttcaatttaattatgattgaaacagctctggtg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 tttcaagttgggggtggtgggcaagttttcaatttaattatgattgaaacagctcttgtg 384
Query: 185 tagcgaacacttaaaacaccccagttgggggagggaataacaaaatctatgcaagattta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagcgaacacttaaaacaccccagttgggggagggaataacaaaatctatgcaagattta 444
Query: 245 ccagaggaagaacaaatttgtttgaggttggc 276
|||||||||||||||||||| |||||||||||
Sbjct: 445 ccagaggaagaacaaatttggttgaggttggc 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
