Query= MSMg01no120_p07.b1 MSMg01no120_p07.b1 CHROMAT_FILE:
MSMg01no120_p07.b1 PHD_FILE: MSMg01no120_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:34 2005
(384 letters)
>mm_chr5_47145431_47146214
Length = 784
Score = 735 bits (380), Expect = 0.0
Identities = 383/384 (99%)
Strand = Plus / Minus
Query: 1 ctcacagttgtttctatgaaatagaaattagttgtcttgataccttgacatgtaatgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ctcacagttgtttctatgaaatagaaattagttgtcttgataccttgacatgtaatgtag 525
Query: 61 ctactctgaaagaatttgttgggccttctgggtatgttataggtgggctcagagaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctactctgaaagaatttgttgggccttctgggtatgttataggtgggctcagagaaaata 465
Query: 121 tgttctgtgtttataaaagagggatcagtgtttggtagaaagatcccagcatgcatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgttctgtgtttataaaagagggatcagtgtttggtagaaagatcccagcatgcatttct 405
Query: 181 gccctattacttttctactcagatttgacaatgggaaaagaaaaaacaatcctatgaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gccctattacttttctactcagatttgacaatgggaaaagaaaaaacaatcctatgaaat 345
Query: 241 tcattttgaactgaaaagttcagaggcttgaaaatccttctccagctgggaaatatccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcattttgaactgaaaagttcagaggcttgaaaatccttctccagctgggaaatatccag 285
Query: 301 aatgtcccatgtagtgatcttttctaggatgctacctttgcctacttgcctcatcatgga 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 284 aatgtcccatgtagtgatcttttctaggatgctacctttgcctacttgtctcatcatgga 225
Query: 361 ttccagaagtttctgcgacagact 384
||||||||||||||||||||||||
Sbjct: 224 ttccagaagtttctgcgacagact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_p07.g1 MSMg01no120_p07.g1 CHROMAT_FILE:
MSMg01no120_p07.g1 PHD_FILE: MSMg01no120_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:34 2005
(296 letters)
>mm_chr5_47038253_47038946
Length = 694
Score = 511 bits (264), Expect = e-149
Identities = 288/296 (97%), Gaps = 2/296 (0%)
Strand = Plus / Plus
Query: 1 attctctccgtaggtaaacactcaaaaataagaataaataaattgtaaaaataaagacat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctctctgtaggtaaacactcaaaaataagaataaataaattgtaaaaataaagacat 260
Query: 61 gaagttggggaaaatataatggagagggagttctggatacactacaatagtgggagatga 120
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 gaagttggggaaaatataat-gagagggagttctggatacactacaatagt-ggagatga 318
Query: 121 gatgtatatatgagcaggaaacattgttcaggctctagagaagaggctataagattaaga 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gatgtatatatgaccaggaaacattgttcaggctctagagaagaggctataagattaaga 378
Query: 181 gcactggctgttcctccagaggattaaggtttagtggctagcacctaattggcaactcac 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcactggctgttcttccagaggattaaggtttagtggctagcacctaattggcaactcac 438
Query: 241 cactgtcttgtttttccagtctctgaggatccaatgttctcttctggtcttcagta 296
||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cactgtcttgtaactccagtctctgaggatccaatgttctcttctggtcttcagta 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 694
Length adjustment: 9
Effective length of query: 287
Effective length of database: 685
Effective search space: 196595
Effective search space used: 196595
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
