TATGGGCCTATAGACTCCTATAGGGAGAGGATCCGCGGAATTCCCCAACC
TTCAGGAGCTTTAATGTACTGTTAATGGATTTATTGGAGACTTTTGACTT
TCAAACGTGGTGATTTTTATTGTAGTTAAAGATTGCTGGAGAATAGTATT
TTTCTATCTTACTTCTATTTTGTTAATGAATTTTAGCCATTTGTTAATAT
TTTTTAATAATTATTTTTTCAATTAAAATTAATGACTATATATATGTATG
TAGGTGTGTGACTATATATATGTATGTAGGTTTTCAAGTAAAATTAATGA
CTATATTTGTGTGTGTGTGTGTCTACAATTCTATAAATCTGTCAGGTAGT
TATTTATTCCCTAATGTATCCACACTGTGATTATTAAGATATATTTTGTG
TTATCATATATTTCTATGAAAGTTATTCTTTAAAATTAGATTAGTAGATT
AAGAAGTTTATTGGACTCTGCAGAATTAGTTTTCCATAATAAACTACTTT
TATTAGCAGCATGAGGAAAAAAAGCTTATTTATTACCGGTGATGCACACC
ACGTAGGCAATACTTTTTAATTTCTACCATCTTGATGTTTTCAAAGTGAT
CTTAGTTTAATTCTCATTGCGTAGCTCTGGCTGACCTAGAACTGGTAGTG
ATTAACCTGATTCTGTCTCCTGAATGCTTGAGTGACAGACATGTGCTACC
ACACCAGGCTGAAATTGCTACAATTCCATAGTAGTTATTTAATTTACATG
TATCAAGGCATGAGCGTAGAAATTATATGAAAACTTACTAGGGTCAGTAT
TCTCCTCTATGGGTCTGGGGATCAAAATGACGTCATCAGACCTTTGGTAA
TTGAGCCACCAGGCTGATGTTTAATGCTCTATATTTCTGGCTTAGTTTAA
TGAAACTTTACCAGAAGATAGGTACTTTGAAATAAGGTTAGGGGAAACAT
CAATTGATAAATAATTTCCGCTATAAAAATTGGGTTGTATTGGCATTTTT
CCCTTTAAATTGGGGC

TTCTCTACCAAGGTACCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATCTTGGAGGATTTTACCTTTGATGACTAT
GAAGCCATCTTCCTTGTCTTTTTTGATAACTTTGTGTTGGAAGTCAATTT
TATTCGATATTAGAATGGCTACTCCAACTTGTTTCGTCAGATCATTTGCC
TGGAAAATTATTCTCCAGCCCTTCATTCTCAGGTAGTGTCTGTCTTTTTC
CCTGAGATGGGTTTCCTGTAAGCAGCAAAATGTTGGGTCCTGTTTGTTTA
TTCAGTCTGTTAGTCTATGTCTTTTTATTGGGGAATTGAGTCCATTGATA
TTAAGAGCTATTAAGGGAAAGTAATTGTTGCTTCCTACTTATTTTGTTGT
TAGAGTTGGCATTCTGTTCTTGTGGCTGTCTTCTTTTAGGTTTGGTGAAG
GATTACTTTCTTGCTTTTTATAGGATGTGGTTTCCATTCCTTGTATTGGT
TTTTTTCTGTTCTTATTTTTTGAAGGGCTGGATTCCTGGAAAGATAATGT
GTGAATTTGGTTTTGTCATGGAATACTTTGGTTTCTCCATCTATGGTAAT
TGAAAGTTTGGCTGGGTATAGTAGCCTGGGTGGGCATTTGTGTTCTCTTA
GTGTCTGTATAACATCTGTCCAGGATCTTCTGGCTTTCATAATGTCTGGT
GAAAAGTCTGGTGTAATTCTAATAGGCCTGCCTTTATATGTTACTTTACC
CTTTTCTCTTACTGCTTTTAATATTCTATCTTTATTTAGTGCATTTGGTG
TTCTGATTATTATGTGTCAGGAGGAATTTCTTTTCTGGTACAGTCTATTT
AAAGTTCTCTAGGCTTCTTGTAAGTTCTGGGGCATCTCTTTCTTTATGTT
CGGGAAGTTTTTCTTCTATTATTTTGTTGAAAAAATTTGCTGGCCCCTTT
AATTTGAAAAATCTTTCTTTCCTCAATCAACTCCTATTATTCTGTAAGCT
TTGGGGAATTTCCCCCTTC

Query= MSMg01no122_c22.b1 MSMg01no122_c22.b1 CHROMAT_FILE:
MSMg01no122_c22.b1 PHD_FILE: MSMg01no122_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:22 2005
         (700 letters)



>mm_chr5_48110466_48111565
          Length = 1100

 Score = 1222 bits (632), Expect = 0.0
 Identities = 641/644 (99%)
 Strand = Plus / Minus

                                                                        
Query: 57   tagttaaagattgctggagaatagtatttttctatcttacttctattttgttaatgaatt 116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 tagttaaagattgctggagaatagtatttttctatcttacttctattttgttaatgaatt 1041

                                                                        
Query: 117  ttagccatttgttaatattttttaataattattttttcaattaaaattaatgactatata 176
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1040 ttagccatttgttaatattttttaataattactttttcaattaaaattaatgactatata 981

                                                                        
Query: 177  tatgtatgtaggtgtgtgactatatatatgtatgtaggttttcaagtaaaattaatgact 236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980  tatgtatgtaggtgtgtgactatatatatgtatgtaggttttcaagtaaaattaatgact 921

                                                                        
Query: 237  atatttgtgtgtgtgtgtgtctacaattctataaatctgtcaggtagttatttattccct 296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920  atatttgtgtgtgtgtgtgtctacaattctataaatctgtcaggtagttatttattccct 861

                                                                        
Query: 297  aatgtatccacactgtgattattaagatatattttgtgttatcatatatttctatgaaag 356
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860  aatgtatccacactatgattattaagatatattttgtgttatcatatatttctatgaaag 801

                                                                        
Query: 357  ttattctttaaaattagattagtagattaagaagtttattggactctgcagaattagttt 416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800  ttattctttaaaattagattagtagattaagaagtttattggactctgcagaattagttt 741

                                                                        
Query: 417  tccataataaactacttttattagcagcatgaggaaaaaaagcttatttattaccggtga 476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740  tccataataaactacttttattagcagcatgaggaaaaaaagcttatttattaccggtga 681

                                                                        
Query: 477  tgcacaccacgtaggcaatactttttaatttctaccatcttgatgttttcaaagtgatct 536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680  tgcacaccacgtaggcaatactttttaatttctaccatcttgatgttttcaaagtgatct 621

                                                                        
Query: 537  tagtttaattctcattgcgtagctctggctgacctagaactggtagtgattaacctgatt 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620  tagtttaattctcattgcgtagctctggctgacctagaactggtagtgattaacctgatt 561

                                                                        
Query: 597  ctgtctcctgaatgcttgagtgacagacatgtgctaccacaccaggctgaaattgctaca 656
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 560  ctgtctcctgaatgcttgggtgacagacatgtgctaccacaccaggctgaaattgctaca 501

                                                        
Query: 657  attccatagtagttatttaatttacatgtatcaaggcatgagcg 700
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500  attccatagtagttatttaatttacatgtatcaaggcatgagcg 457


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space:   752100
Effective search space used:   752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)