Query= MSMg01no122_f06.b1 MSMg01no122_f06.b1 CHROMAT_FILE:
MSMg01no122_f06.b1 PHD_FILE: MSMg01no122_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:39 2005
(654 letters)
>mm_chr5_14127480_14128535
Length = 1056
Score = 1162 bits (601), Expect = 0.0
Identities = 639/655 (97%), Gaps = 8/655 (1%)
Strand = Plus / Minus
Query: 5 tgtcacaaagcaaataatagctaga--acccctacccataaattctttgaaatccagagg 62
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 856 tgtcacaaagcaaataatagctagaagacc---acccataaattctttgaaatccagagg 800
Query: 63 ttgtgggagacatattcatagaaagtctcctgtgggatgggatagagactgtgagaggaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttgtgggagacatattcatagaaagtctcctgtgggatgggatagagactgtgagaggaa 740
Query: 123 aacagtcggcaggggtcatgacccttcctatctctctccgctggccacagacccatttca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aacagtcggcaggggtcatgacccttcctatctctctccgctggccacagacccatttca 680
Query: 183 cagagcagcagacagatactccagagaaactggacaacttgtaaactcagaaaataccac 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 679 cagagcagcagacagatactccagagaaactggacaacttgtaaactcagaaaatacctc 620
Query: 243 acaacataaaacttgaagaaaataaaatgaattaaaacatctacctctatcaacgttcca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 acaacataaaacttgaagaaaataaaatgaattaaaacatctacctctatcaacgttcca 560
Query: 303 taaatccaggtgataatatttacttgaaaagaaagcattaatttgccaaatgtgccaagg 362
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 taaatccaggtgataatacatacttgaaaagaaagcattaatttgccaaatgtgccaagg 500
Query: 363 catttgcttctttttaaatatcatccttgaacatgtcaagtgaattttcaaagtattgtt 422
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 catttgcttcttttttaatatcatccttgaacatgtcaagtgaattttcaaagtattgtt 440
Query: 423 tctgccagataaaagcaaaagggaaatatttaacatataactgcccatttcccagccttg 482
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tctgccagatgaaagcaaaagggaaatatttaacatataactgcccatttcccagccttg 380
Query: 483 actttgtcagaacagatgcatgcaaccaggtagctggccatccatcatccagtcaaacat 542
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 actttgttagaacagatgcatgcaaccaggtagctggccatccatcatccagtcaaacat 320
Query: 543 gattt---aaaaaaaaaaccttgtatccctctggcaaggtcattgctcctatctggcaaa 599
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gatttaaaaaaaaaaaaaccttgtatccctctggcaaggtcattgctcctatctggcaaa 260
Query: 600 agaagttccacatgaaattgggaacaaaaagtcaattttctttttctgccattgt 654
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 259 agaagttccacaagaaattgagaacaaaaagtcaattttctttttctgccattgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1056
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1046
Effective search space: 673624
Effective search space used: 673624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_f06.g1 MSMg01no122_f06.g1 CHROMAT_FILE:
MSMg01no122_f06.g1 PHD_FILE: MSMg01no122_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:40 2005
(592 letters)
>mm_chr5_14031449_14032440
Length = 992
Score = 1129 bits (584), Expect = 0.0
Identities = 590/592 (99%)
Strand = Plus / Plus
Query: 1 tttaaatcttgcttctggttctgtggcttaagcaagtaacttatgttttgtgaccaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaatcttgcttctggttctgtggcttaagcaagtaacttatgttttgtgaccaagag 260
Query: 61 ccctctctgctttaaagcagtgcaacgtttaatttgcagattgggagggatcagggaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctctctgctttaaagcagtgcaacgtttaatttgcagattgggagggatcagggaaga 320
Query: 121 tgatacaaatggatgtggtacaatacttccaggcctttcacaaataactcaatgaaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatacaaatggatgtggtacaatacttccaggcctttcacaaataactcaatgaaccag 380
Query: 181 aagacacttgagcatcatgcatgctggtttcctttttagatgtaaaaggaaccatgagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagacacttgagcatcatgcatgctggtttcctttttagatgtaaaaggaaccatgagca 440
Query: 241 aaactctcagcttccaatttaaaatacttttaaattgattgtacttactcatcacaggtt 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 aaactctcagcttccaatttaaaatacttttaaattgaaggtacttactcatcacaggtt 500
Query: 301 ttccctaaaagcaagagttttccttaaaggccattgtgaccactgtaggtgactacaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccctaaaagcaagagttttccttaaaggccattgtgaccactgtaggtgactacaaat 560
Query: 361 tgcaggcattgttggagtcccttgcatttatatgttactgtagaattactttgttaataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcaggcattgttggagtcccttgcatttatatgttactgtagaattactttgttaataa 620
Query: 421 tttaaaggaagttgcaactttgccagctggcacctgggagacaacagatcaaatcctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttaaaggaagttgcaactttgccagctggcacctgggagacaacagatcaaatcctgaa 680
Query: 481 aatacctacctaacaaaggtaattgtaggcccgccattgtaaagcacaatagagctgata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatacctacctaacaaaggtaattgtaggcccgccattgtaaagcacaatagagctgata 740
Query: 541 ttacaaaagccagaccacactgagcaatgctagtctaaacagtgtccggtag 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttacaaaagccagaccacactgagcaatgctagtctaaacagtgtccggtag 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
