Query= MSMg01no125_a24.b1 MSMg01no125_a24.b1 CHROMAT_FILE:
MSMg01no125_a24.b1 PHD_FILE: MSMg01no125_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:58 2005
(437 letters)
>mm_chr5_122667563_122668400
Length = 838
Score = 762 bits (394), Expect = 0.0
Identities = 427/438 (97%), Gaps = 1/438 (0%)
Strand = Plus / Minus
Query: 1 ccccaccccctcctctac-cacctggcttccaagccccgcagatgggccaggagtgtgtg 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccccaccccctcctctacacacctggcttccaagccccgcagatgggccaggagtgtgtg 534
Query: 60 tccatctgtggaatgaggctagcaggtaggccacacctcttgcttgtcctatcatggtgt 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 533 tccatctgtggaatgaggctagcaggtgggccacacctcttgcttgtcctatcatggtgt 474
Query: 120 taccagcctttgagaaatggtagctatccccaggtgccctgctaatgccactacaaggca 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 473 taccagcctttgagaaatggtagctatccccaggtgccctgctaatgccactaccaggca 414
Query: 180 taatcctcactgcacctctgtaggctgccatttcccagaatggaaaactgagggacaggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 taatcctcactgcacctctgtaggctgccatttcccagaatggaaaactgagggacaggg 354
Query: 240 aaaggaagaaggagaaatttactctaaggaagtcaatgtccaggcaggtggccaaggttg 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 353 aaaggaagaaggagaaagggactctaaggaagtcaatgtccaggcaggtggccaaggccg 294
Query: 300 tctctgcacaattagtaactgccaatcagttctgtgcagtgatgcgcgatcacccctgcc 359
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 293 tctctgcagaattagtaactgccaatcagttctgtgcagtgatgcgcgctcacccccgcc 234
Query: 360 ctgaatatgcttgtgtttttaaaaccaaggagggctgggcggtggtggcacacgccttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ctgaatatgcttgtgtttttaaaaccaaggagggctgggcggtggtggcacacgccttta 174
Query: 420 atcccagcacttgggagg 437
||||||||||||||||||
Sbjct: 173 atcccagcacttgggagg 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 838
Length adjustment: 9
Effective length of query: 428
Effective length of database: 829
Effective search space: 354812
Effective search space used: 354812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_a24.g1 MSMg01no125_a24.g1 CHROMAT_FILE:
MSMg01no125_a24.g1 PHD_FILE: MSMg01no125_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:59 2005
(349 letters)
>mm_chr5_122475723_122476471
Length = 749
Score = 644 bits (333), Expect = 0.0
Identities = 345/349 (98%)
Strand = Plus / Plus
Query: 1 tctactgggatcgaaaggtcatacataggcaccgtgagtgcactcacgtggagccggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctactgggatcgaaaggtcatacataggcaccgtgagtgcactcacgtggagccggctc 260
Query: 61 tccactcacgtgggttcggaactctacaaggtgcagtgggatcacccgggtgacctgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccactcacgtgggttcggaactctacaaggtgcagtgggatcacccgggtgacctgtta 320
Query: 121 ggctcaagactgccccagggatgctgactcaataggttttttaaaggccctgaacaaact 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 ggctcaagactgccccagggatgctgactcaataggtttttaaaaggccctgaacaaact 380
Query: 181 gattcccaggcagcatagatgctgctgcaggtcccaagaaccttgagccaagctggggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattcccaggcagcatagatgctgctgcaggtcccaagaaccttgagccaagctggggca 440
Query: 241 gttaaaggctcatatttttaaccccagcacttgggaggtagaggcaggtgggtctctgag 300
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttaaaggctcacacctttaaccccagcacttgggaggtagaggcaggtgggtctctgag 500
Query: 301 tttgaggccatcctggtctatagagccagttccatgacagccagggcta 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttgaggccatcctggtctatagagccagttccatgacagccagggcta 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
