Query= MSMg01no127_g05.b1 MSMg01no127_g05.b1 CHROMAT_FILE:
MSMg01no127_g05.b1 PHD_FILE: MSMg01no127_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:06 2005
(150 letters)
>mm_chr5_18637782_18638331
Length = 550
Score = 290 bits (150), Expect = 2e-83
Identities = 150/150 (100%)
Strand = Plus / Minus
Query: 1 taaattgccagatgtattctgctgcctgacactagatgttagttgtagcaggtggctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 taaattgccagatgtattctgctgcctgacactagatgttagttgtagcaggtggctcct 291
Query: 61 gctttcctgtgattttgtgtcattcagttaagattcagattctaagatttaggttcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gctttcctgtgattttgtgtcattcagttaagattcagattctaagatttaggttcagga 231
Query: 121 agtctggatgatattcagcctttttatata 150
||||||||||||||||||||||||||||||
Sbjct: 230 agtctggatgatattcagcctttttatata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 550
Length adjustment: 8
Effective length of query: 142
Effective length of database: 542
Effective search space: 76964
Effective search space used: 76964
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no127_g05.g1 MSMg01no127_g05.g1 CHROMAT_FILE:
MSMg01no127_g05.g1 PHD_FILE: MSMg01no127_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:06 2005
(295 letters)
>mm_chr5_18547893_18548588
Length = 696
Score = 497 bits (257), Expect = e-145
Identities = 284/295 (96%), Gaps = 7/295 (2%)
Strand = Plus / Plus
Query: 1 aattctgtactaaaac-atatctgtattaaaaccatctggttctgg--tt-ttgtcacga 56
|||||||||||||||| ||||||||||||||||||||||||||||| || |||| ||
Sbjct: 201 aattctgtactaaaaccatatctgtattaaaaccatctggttctgggcttgttgt---ga 257
Query: 57 ctgctggtggtgttgtttgttggctttaatttgatttgttttggggagtactgggaaatt 116
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 258 ttgctggtggtgttgtttgttggctttaatttgatttgttttggggagtaccgggagatt 317
Query: 117 cctacttcacttaattttacgagggattataggcctggttaatttgcttgcatgatattt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cctacttcacttaattttacgagggattataggcctggttaatttgcttgcatgatattt 377
Query: 177 atttaactttggtaagtggtatgaaggagaaaattaccaatttctttcagattttccaag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atttaactttggtaagtggtatgaaggagaaaattaccaatttctttcagattttccaag 437
Query: 237 tttgtagaacacaggtttttaaaaagtatattctggttattcttcgtgtattttt 291
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 438 tttgtagaacacaggtttttaaaaagtatattctggttattctttgtgtattttt 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 696
Length adjustment: 9
Effective length of query: 286
Effective length of database: 687
Effective search space: 196482
Effective search space used: 196482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
