Query= MSMg01no127_n17.b1 MSMg01no127_n17.b1 CHROMAT_FILE:
MSMg01no127_n17.b1 PHD_FILE: MSMg01no127_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:45 2005
(371 letters)
>mm_chr5_21922541_21923311
Length = 771
Score = 629 bits (325), Expect = 0.0
Identities = 358/369 (97%)
Strand = Plus / Minus
Query: 3 gaattcacccattttttctgcttgaaaacataaaacataacatctattttaagctcttaa 62
||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||
Sbjct: 571 gaattcacccattttttatgcttgaaaacataaaacatcatatctattttaagctcttaa 512
Query: 63 acttggttaaatattctccaaaacataagcagtttctggggatagtgagctgctgctcca 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 acttggttaaatattctccaaaacataagcagtttctggggatagtgagctgctgctccg 452
Query: 123 taggcccagcatccactgccaggcctgacctcagtttaagccctccatggaaggagagaa 182
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 451 taggcccagcatccactgccaggcctgacctcagtttgagccttccatggaaggagagaa 392
Query: 183 cccactgagcgtcctctggtctcatgtacctgcacacacatgtacacaaaatcaataaag 242
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 391 cccactgagcgtcctctggtctcatgtgcctgcacacacatgtacacaaaatcaataaag 332
Query: 243 tggaaatggaggtgattgatttcatcgataaatgtatgatattctcaaaaataaagaaga 302
|||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 331 tggaaatggaggtgatagatttcatcgataaatgcatgaaattctcaaaaataaagaaga 272
Query: 303 cttaatgaaaaagagggattaaaaagacgtctgtctaaacacttaggagcacttgccact 362
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 271 cttaatgaaaaagagggattaaagagacgtctgtctaaacacttaggagcacttgccact 212
Query: 363 cttgcaaag 371
|||||||||
Sbjct: 211 cttgcaaag 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_n17.g1 MSMg01no127_n17.g1 CHROMAT_FILE:
MSMg01no127_n17.g1 PHD_FILE: MSMg01no127_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:45 2005
(287 letters)
>mm_chr5_21770551_21771236
Length = 686
Score = 501 bits (259), Expect = e-146
Identities = 280/287 (97%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 caggaacctgagcaccaggctgaaggccgaaggctgaagacccttttgtctctatctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 caggaacctgagcaccaggctgaaggccgaaggctgaagacccttttgtgtctatctcct 260
Query: 61 gatcaacagttggccacctccatagggagtactcacacgctctcaatgcacaggatcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 gatcaacagttggccacctccatagggagtactcacacgctctcaatgcacaggatcgtt 320
Query: 121 ggctagtgaacacaaagctgtactgccacagaatggaactgtgcttccatcctatctgtg 180
||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 321 ggctaatgaacacaaagctgtactgccacagaatgga-ctgtgcttccgtcctatctgtg 379
Query: 181 ttgtagcccaacaagttaatacatagctttgttctcgaggaaggtgaaaccttacatgac 240
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 380 ttgtagcccaacaaattaatacatagctttgttctccaggaaggtgaaaccttacatgac 439
Query: 241 taagatctaatacatgcagatatctaaacatgcacaccaatgtgtgc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taagatctaatacatgcagatatctaaacatgcacaccaatgtgtgc 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
