Query= MSMg01no128_g17.b1 MSMg01no128_g17.b1 CHROMAT_FILE:
MSMg01no128_g17.b1 PHD_FILE: MSMg01no128_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:30 2005
(427 letters)
>mm_chr5_144322736_144323562
Length = 827
Score = 746 bits (386), Expect = 0.0
Identities = 404/410 (98%)
Strand = Plus / Minus
Query: 18 caaaatatcaccaagcaccaggtccttgcagagtgaggccacagagctgcacaggagcca 77
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 827 caaaatatcaccaaacaccaggtccttgcagagtggggccacagagctgcacaggagcca 768
Query: 78 gacagcgagaagctctgttcactgtcataggtcgccctgaattccaaacaagatggagaa 137
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 767 gacagcgagaagctctgtccactgccataggtcgccctgaattccaaacaagatggagaa 708
Query: 138 aggggatcataagttcaaggccatccttggctacatagtgagtctgagccagcctgtgct 197
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 agaggatcataagttcaaggccatccttggctacatagtgagtctgagccagcctgtgct 648
Query: 198 acactgagaccctgactcaatcagataagtatacaaatcaagtacacataagatatagat 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 acactgagaccctgactcaatcagataagtatacaaatcaagtacacataagatatagat 588
Query: 258 catcagtgcccttgggctagcctagtcttatgaagctcccaagcgcacgtcaggtctaca 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 catcagtgcccttgggctagcctagtcttatgaagctcccaagcgcacgtcaggtctaca 528
Query: 318 aaagaatcaatgctgttaacttatggcaaaccaccctgcccagcagaatgtgagagagat 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aaagaatcaatgctgttaacttatggcaaaccaccctgcccagcagaatgtgagagagat 468
Query: 378 gagctgatttccaagtactgggagtcagttcctccacacccgctccctcc 427
|||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 467 gagctgatttccaagtactgggagtcagttcctccacacctgctccctcc 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_g17.g1 MSMg01no128_g17.g1 CHROMAT_FILE:
MSMg01no128_g17.g1 PHD_FILE: MSMg01no128_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:30 2005
(362 letters)
>mm_chr5_144208360_144209118
Length = 759
Score = 584 bits (302), Expect = e-171
Identities = 346/362 (95%), Gaps = 3/362 (0%)
Strand = Plus / Plus
Query: 1 cttatccctttctctcttacatcacttgcatcaagatattgtctctgttcctgctacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cttatccctttctctcttacatcacttgcatcaagatattgtctctgttaatgctacttg 260
Query: 61 tgtagatgtcattaccttgggccaaatggctgtattctttaaggatgtagggtcaaagct 120
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggatgtcattaccttggggcaaatggctgtattctttaaggatgtagggtcaaagct 320
Query: 121 gcttgctccaacttgcttcccctgcaaaccttttcatgtatactattattcttgttggaa 180
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcactccaacttgcttcccctgcaaaccttttcatgtatactattattcttgttggaa 380
Query: 181 gcagaattgtatttgtcataatttaagctattacatattagggcttggcagctccgcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 gcagaattgtatttgtcataatttaagctattacatattagggcttggcagctccacacc 440
Query: 241 aaagcccttctgttggaagtactcagccttgaactaaagaaggaaggcaaagtatgcgtt 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 441 aaagcccttctgttggaagtactcacccttgaactaaagaaggaaggcaaagtatatgtt 500
Query: 301 ctttcctctttatcagtaagagggcttagggacagctatcctccccggcttctctgttgt 360
|| |||| ||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 501 ct---ctctctatcagtaagagggcttagggacagctatcctctctggcttctctgttgt 557
Query: 361 gt 362
||
Sbjct: 558 gt 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 759
Length adjustment: 9
Effective length of query: 353
Effective length of database: 750
Effective search space: 264750
Effective search space used: 264750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
