TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGTTTATTTCCGTGTTCCATGTTTTAATTTGGTTATTTGGGTTGCT
TGTCTAACTTCTTGACTTCCTTATAAATTTTGTATATTAGCCCTTTGTCA
GATGTAGGTTTAGTGAAGATCCTTTTCCATTCTGTATGCTGCTATTTTGT
TCATTAACAGTGTTTTTTGCCTTCCAGAAGTTTTCAGCTTTATGTGGTCT
CATTTATCAATTGCTGATATTAGAGCCTGAGTCATTGGTATTCTGTTCAG
GAAACTGTCTCCTATACCATGTGTTCAAGGGTATTCCCCACTTGTATTCT
ATGAGATTTAGTGTATCTGGTTATATTGAGCTACTTAATCTACCTTAACT
TGAGATTTGTGCAGGACAATAAATATGGATCTATTTATATTCTTTTACAA
GCAGAAATCCAGTTAGACTAACACCATTTGTTGAAGACTCTTTCTTTTCT
TATATATTGCTTGGTTTTACCTTCTTTATCAAAAACCAAGTGTGCATAGG
TATGTGGGTTTATTTCTGGGTCTTCTGTTTGATTCCATTGATCAACTTGT
CTGCTTCTGTACCAATACAGTGTATGTTTTTTAAAAATCACTATTTCTAT
GTAGGGCAGCTTGAGTTCACGGATGGTGACTCCTACCCAAGTTTTTTTTT
AGTCAAGGATCGC

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAACAGAGAAAATAGGCCAGTGAT
AGACAGAGAACCTTTGTCTAAAGCTCAATACTTTTCCTAGCCAGTAGTCT
ATAAACAAACAAACTATGGCTCCCTGGCTGCCAATTATAATTGAAGGCTC
TAGAGTTCCAGTTCTACAATTTGAATATTGTGATATTAAATTCCCTCATA
CTTATTAATAGTGTCTCCTGGAAGCATAGTTTAAAACTCATTTGGCTCAG
CAAGTGTTGTCTTTACTTGTAATTAGACTTGCCTGAAGTTCCATGTCTTC
TGGACCTTAAGAAATTTACCTTAAGATGAATATAGAAAGCCAAAGAAACT
GCCAACAGAGTAGAACTGACTTGTGAGACAGATGCTGGAAATGTGATAAA
TGCTGTCTTGTAACACCAGTGGTAAGGGCTTCCCAACTCTGTCCATTTAA
ATCTTGTTGAGAGTGACTATTTGGAAGATTATCCAGAGATAAACCAAATG
ATTTTTTTTAATCCCAGACAATTGTTTGCTTTTGTAAAATTTACTCTAGG
TCAACAAGTGTCCAGTGATCTGTTGAGTATAAAACTGACAATTATAAATC
AGTAATATAAAAGGTGGAACTTTTTCTTTGCATCTGGACACTCATACCCA
AAATTTTCTTTTTACCAAA

Query= MSMg01no129_e23.g1 MSMg01no129_e23.g1 CHROMAT_FILE:
MSMg01no129_e23.g1 PHD_FILE: MSMg01no129_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:40 2005
         (634 letters)



>mm_chr5_79057757_79058791
          Length = 1035

 Score = 1212 bits (627), Expect = 0.0
 Identities = 633/635 (99%), Gaps = 1/635 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaacagagaaaataggccagtgatagacagagaacctttgtctaaagctcaatacttttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 aaacagagaaaataggccagtgatagacagagaacctttgtctaaagctcaatacttttc 776

                                                                       
Query: 61  ctagccagtagtctataaacaaacaaactatggctccctggctgccaattataattgaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ctagccagtagtctataaacaaacaaactatggctccctggctgccaattataattgaag 716

                                                                       
Query: 121 gctctagagttccagttctacaatttgaatattgtgatattaaattccctcatacttatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gctctagagttccagttctacaatttgaatattgtgatattaaattccctcatacttatt 656

                                                                       
Query: 181 aatagtgtctcctggaagcatagtttaaaactcatttggctcagcaagtgttgtctttac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aatagtgtctcctggaagcatagtttaaaactcatttggctcagcaagtgttgtctttac 596

                                                                       
Query: 241 ttgtaattagacttgcctgaagttccatgtcttctggaccttaagaaatttaccttaaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttgtaattagacttgcctgaagttccatgtcttctggaccttaagaaatttaccttaaga 536

                                                                       
Query: 301 tgaatatagaaagccaaagaaactgccaacagagtagaactgacttgtgagacagatgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgaatatagaaagccaaagaaactgccaacagagtagaactgacttgtgagacagatgct 476

                                                                       
Query: 361 ggaaatgtgataaatgctgtcttgtaacaccagtggtaagggcttcccaactctgtccat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggaaatgtgataaatgctgtcttgtaacaccagtggtaagggcttcccaactctgtccat 416

                                                                       
Query: 421 ttaaatcttgttgagagtgactatttggaagattatccagagataaaccaaatga-tttt 479
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 415 ttaaaccttgttgagagtgactatttggaagattatccagagataaaccaaatgattttt 356

                                                                       
Query: 480 ttttaatcccagacaattgtttgcttttgtaaaatttactctaggtcaacaagtgtccag 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ttttaatcccagacaattgtttgcttttgtaaaatttactctaggtcaacaagtgtccag 296

                                                                       
Query: 540 tgatctgttgagtataaaactgacaattataaatcagtaatataaaaggtggaacttttt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgatctgttgagtataaaactgacaattataaatcagtaatataaaaggtggaacttttt 236

                                              
Query: 600 ctttgcatctggacactcatacccaaaattttctt 634
           |||||||||||||||||||||||||||||||||||
Sbjct: 235 ctttgcatctggacactcatacccaaaattttctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1035
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1025
Effective search space:   639600
Effective search space used:   639600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)