Query= MSMg01no129_p10.b1 MSMg01no129_p10.b1 CHROMAT_FILE:
MSMg01no129_p10.b1 PHD_FILE: MSMg01no129_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:33 2005
(654 letters)
>mm_chr5_75033294_75034346
Length = 1053
Score = 1158 bits (599), Expect = 0.0
Identities = 624/633 (98%), Gaps = 3/633 (0%)
Strand = Plus / Minus
Query: 23 catgtattctagtactcctctaaaaagccccccattgtaccagcataatgaatgcatccc 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 catgtattctagtactcctctaaaaagccccccattgtaccagcataatgaatgcatcaa 794
Query: 83 aagaagacatgtgatcaaaagtactcattaggcttgagtataggcgtaatgattttgaaa 142
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 793 aagaaggcatgtgatcaaaagtactcattaggcttgagtataggcataatgattttgaaa 734
Query: 143 catactgaagctgactgtgggacatcggtctatattcccagcctgcaaggagctaaagcg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 catactgaagctgactgtgggacatcggtctatattcccagcctgcaaggagctaaagcg 674
Query: 203 agaggattataaagccaagaccagcttaccagcctgggctacattgcagtgagaacctcc 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 agaggattataaagccaagaccagcttaccagcctgggctacattgcagtgagaacctcc 614
Query: 263 ccccccccaaacaaaacaaacaataaaacttccagcatttcgtagggagtctgtgaggaa 322
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 613 ccccccccaaacaaaacaaacaataaaacttccagcgtttcgtagggagtctgtgaggaa 554
Query: 323 gataaaggccagtctaaagtatattcccttgtctcctttccccatcattttgcct-ttgg 381
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 553 gataaaggccagtctaaagtatattcccttgtctcctttccccatcattttg--tgttgg 496
Query: 382 aatatgtgggactaaaaagggatgtgatgagctttctgagggaaagggtcccatatcaca 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aatatgtgggactaaaaagggatgtgatgagctttctgagggaaagggtcccatatcaca 436
Query: 442 gtcaaccacagataactaacactttgccagggctgtgtgggcgcatcctgcagttcccaa 501
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 435 gtcaaccacagataactaacactttgccagggctgtgtgggcacatcctgcagttcccaa 376
Query: 502 cacagtgtttctgtcaacgcagtactggaagggtttactgacagccctgtggttgcccag 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cacagtgtttctgtcaacgcagtactggaagggtttactgacagccctgtggttgcccag 316
Query: 562 agctaaccattagcagaggtcaaactggtgtctctaccaccagccatagaagacatgaga 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agctaaccattagcagaggtcaaactggtgtctctaccaccagccatagaagacatgaga 256
Query: 622 atctgtgagccagctcttcccaagtcccagaag 654
|||||||||||||||||||||||||||||||||
Sbjct: 255 atctgtgagccagctcttcccaagtcccagaag 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1053
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1043
Effective search space: 671692
Effective search space used: 671692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_p10.g1 MSMg01no129_p10.g1 CHROMAT_FILE:
MSMg01no129_p10.g1 PHD_FILE: MSMg01no129_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:33 2005
(573 letters)
>mm_chr5_74911248_74912220
Length = 973
Score = 1033 bits (534), Expect = 0.0
Identities = 565/578 (97%), Gaps = 5/578 (0%)
Strand = Plus / Plus
Query: 1 ctataaaactatctatcaaatggagatccataaacagactcacttctctgccactgctaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 ctataaaactatctatcaaatggagatccataaacagactcacttctctgaaactgctaa 260
Query: 61 aagcttgttaaatatgatggcagtcctatacaatgccatactcattggcttattatgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcttgttaaatatgatggcagtcctatacaatgccatactcattggcttattatgctt 320
Query: 121 agtaggtatgattatttatgtatttagatatataaatattatccattatgaatttttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtaggtatgattatttatgtatttagatatataaatattatccattatgaatttttcta 380
Query: 181 ctggagtagtgtctcagtcattctttctttcttcttttaaaaatc-----tcccttccag 235
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 ctggagtagtgtctcagtcattctttctttcttcttttaaaaatcagatctcccttccag 440
Query: 236 tctggaccagtgccctgagcagacctctgcagccagtcccaaaacacccagagtaatctc 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tctggaccagtgccctgagcagacctctgcagccagtcccaaaacacccagagtaagctc 500
Query: 296 cactcctaggggctctaacatgcccaggtatcacagaatcagaggtgacgaggacacaac 355
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 cactcccaggggctctaacatgcccaggtatcacagaatcagaggtgaggaggacacaac 560
Query: 356 atctgtcccaacactggaagtaactgggaccagtgggatccaggcacccaggaactccat 415
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctgtcccaatactggaagtaactgggaccagtgggatccaggcacccaggaactccat 620
Query: 416 tcaaccagtgacacaagttccttccggtctgggccagtgccctgagcagaccttgggcgc 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 tcaaccagtgacacaagttccttccggtctgggccagtgccctgagcagaccttgggccc 680
Query: 476 gaactccacagccagtcccacaaaacccagaagaagctctactcccaggtgctctaacac 535
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 gaactccacagccagtcccacaaaacccagaagaagctccactcccaggtgctctaacac 740
Query: 536 gcccaggatcacaggatcacaggatcacaggagcttgg 573
||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcccaggatcacaggatcacaggatcacaggagcttgg 778
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
