Query= MSMg01no131_i21.b1 MSMg01no131_i21.b1 CHROMAT_FILE:
MSMg01no131_i21.b1 PHD_FILE: MSMg01no131_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:49 2005
(568 letters)
>mm_chr5_19091752_19092719
Length = 968
Score = 1036 bits (536), Expect = 0.0
Identities = 560/568 (98%), Gaps = 1/568 (0%)
Strand = Plus / Minus
Query: 1 aacgatttgattttatgtgtgttcattctgctttttccactgtgacaaacaatttgatag 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 903 aacgatttgattttatgtgtgttcattctgctttttccaccgtgacaaacaatttgatag 844
Query: 61 aaaaaaaaaaaaggtcaaatagaagtcagctttccaatctctttgtaactctgctacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 -gaaaaaaaaaaggtcaaatagaagtcagctttccaatctctttgtaactctgctacccc 785
Query: 121 tgtacaatcttcatggcacaggagacctagcctgacacagtgggctcacaaggctctaat 180
||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 784 tgtacaatcttcatgacacaggagacctagcctgacgcggtgggctcacaaggctctaaa 725
Query: 181 catagccccaaatatgatttcggactattgagtttatttcacaatctttagcattttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 catagccccaaatatgatttcggactattgagtttatttcacaatctttagcattttctg 665
Query: 241 cactttaatcttcgctctattgaaaatagtcccattggccacataatacaaacttccctt 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 664 cactttaatcttcgctctattgaaaatagtctcattggccacataatacaaacttccctt 605
Query: 301 ttgaccataccttatgacttatgagccaataccatttatttcagtgctgactactcttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ttgaccataccttatgacttatgagccaataccatttatttcagtgctgactactcttat 545
Query: 361 tttaaattgtggttcttttcaaggatatggtcatagaaaaatatacttgcttttctcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tttaaattgtggttcttttcaaggatatggtcatagaaaaatatacttgcttttctcaat 485
Query: 421 tgttttgacaacttgacttcctaaaatctaagtgcacatactatgcaatgccttgctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgttttgacaacttgacttcctaaaatctaagtgcacatactatgcaatgccttgctttt 425
Query: 481 acagtttattcacaaatggctggatgtgcttcattgtccagcatgtggaggcatgcaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 acagtttattcacaaatggctggatgtgcttcattgtccagcatgtggaggcatgcaaag 365
Query: 541 tttgattagtattctacattcctaagca 568
||||||||||||||||||||||||||||
Sbjct: 364 tttgattagtattctacattcctaagca 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_i21.g1 MSMg01no131_i21.g1 CHROMAT_FILE:
MSMg01no131_i21.g1 PHD_FILE: MSMg01no131_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:49 2005
(228 letters)
>mm_chr5_18957141_18957768
Length = 628
Score = 429 bits (222), Expect = e-125
Identities = 225/226 (99%)
Strand = Plus / Plus
Query: 1 gtctccaccagtgacctttagcatcaagctgtggaccagttctttaatactgagactttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctccaccagtgacctttagcatcaagctgtggaccagttctttaatactgagactttg 260
Query: 61 aagagacaattaagatccaaactataacagtaactcttgaggacagttagtgaggaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagagacaattaagatccaaactataacagtaactcttgaggacagttagtgaggaaaat 320
Query: 121 ggaaagcatgtcttaatttgaagctatataatttctcgctatgtgccataggtattccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaagcatgtcttaatttgaagctatataatttctcgctatgtgccataggtattccac 380
Query: 181 atactttaataatcattaattgttgtagatgtttaaatttatatgg 226
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 atactttaataatcattaaatgttgtagatgtttaaatttatatgg 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 228
Length of database: 628
Length adjustment: 9
Effective length of query: 219
Effective length of database: 619
Effective search space: 135561
Effective search space used: 135561
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
