Query= MSMg01no131_m13.b1 MSMg01no131_m13.b1 CHROMAT_FILE:
MSMg01no131_m13.b1 PHD_FILE: MSMg01no131_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:07 2005
(638 letters)
>mm_chr5_9250914_9251951
Length = 1038
Score = 1203 bits (622), Expect = 0.0
Identities = 634/638 (99%)
Strand = Plus / Plus
Query: 1 gtatccttcaggataaaatatgatctctgaacaaataactaacccaaaatcccatttcct 60
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 201 gtatccttcaggataaaatatgatctctgaacaaataactaacccaaaatgctatttcct 260
Query: 61 ccaactgggtaatgagtatagggaggacatttctcatggttatatttaatgatcaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaactgggtaatgagtatagggaggacatttctcatggttatatttaatgatcaagaaa 320
Query: 121 caaaacttttgtatcctgaatccattattttggcctctgctagcttaaaagtcttagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaacttttgtatcctgaatccattattttggcctctgctagcttaaaagtcttagtat 380
Query: 181 tcatttgcagaatattcctccaggggacaaaattgatctggagcttgaaattaccctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatttgcagaatattcctccaggggacaaaattgatctggagcttgaaattaccctgtg 440
Query: 241 ttattttgggactttcctttgcagtggactgagaagttaaaaatattaggatgatatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttattttgggactttcctttgcagtggactgagaagttaaaaatattaggatgatatttc 500
Query: 301 ccatgaatttctaagacagagtccagaggttcctctggagtgcctcttagtactgtgtta 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatgaatttctaagacaaagtccagaggttcctctggagtgcctcttagtactgtgtta 560
Query: 361 tctagtgataaaagttagtgaaagactacagcaactctgtatacgtaagatcatgaggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctagtgataaaagttagtgaaagactacagcaactctgtatacgtaagatcatgaggct 620
Query: 421 aattattcagtagctaaaatttcagtgacctcaataaagatgagatgagatagtggcgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattattcagtagctaaaatttcagtgacctcaataaagatgagatgagatagtggcgga 680
Query: 481 gcacagaggaaacaaagaggaaggaatgccagaggaccccaagggtaataacaaaattga 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 681 gcacagaggaaacaaagaggaaggaatgccagaggaccccaagtgtaataacaaaattga 740
Query: 541 tttttttcatgtatggatccataaattttaatacctatagtagctacttctaaaattaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttttttcatgtatggatccataaattttaatacctatagtagctacttctaaaattaag 800
Query: 601 atacaaaatagattcaccatatctacatgccacttcag 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atacaaaatagattcaccatatctacatgccacttcag 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_m13.g1 MSMg01no131_m13.g1 CHROMAT_FILE:
MSMg01no131_m13.g1 PHD_FILE: MSMg01no131_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:07 2005
(318 letters)
>mm_chr5_9408805_9409523
Length = 719
Score = 540 bits (279), Expect = e-158
Identities = 309/319 (96%), Gaps = 1/319 (0%)
Strand = Plus / Minus
Query: 1 tattgcatagatatacacatataagtttcatgtccataatgtataaaaaaaactttttga 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 519 tattgcatagatatacacatataagtttcatgtccataacgtataaaaaaaacttcttga 460
Query: 61 gctcagtaattaagtcatcactatgtcccaaatgattaaaaataaagaaagaaaacgtag 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 459 gctcagtaattaagtcatcactatgtcccaaatgattaaaaagaaagaaagaaaacgtag 400
Query: 121 tgtcagatgggtgaggagcagaagaatattatattcaactgaaatttgtgttcagaaaat 180
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 399 tgtcagatgggtgaggagcagaagaatactatattcaactgaaatttgtgtccagaaaat 340
Query: 181 tattatattaaagaacctatacttaaaaagggctgcttactgtagattgctcttgatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tattatattaaagaacctatacttaaaaagggctgcttactgtagattgctcttgatgaa 280
Query: 241 taagctagcctaactagaaaaaaa-ttgtgactattcaagttcaccaaaaaaagaacctg 299
|||||||| | ||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 279 taagctagtcgaactagaaaaaaaattgtgactattcaagttccccaaaaaaagaacctg 220
Query: 300 gtgtcccatcacatgcggc 318
||||| |||||||||||||
Sbjct: 219 gtgtcgcatcacatgcggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space: 219390
Effective search space used: 219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
