NAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCG
CGGAATTCCGTATTTTTCCATGAATTCATTTTCTGAATTGCATTATTTGA
TTTTTTTTGGTTTCTTGTTCCTTGCCTATTTGCATATTTTTCTCTATCAG
ATGTGTTATAAATCATATCCCTTTTTATAGGCTGCCCCTTCGTTCAATAG
ACAATATCCTTTGCCTACAGAGGAATTTTAGTTTCATGAAGTCTCATATG
TTGTAAATCTTAGTGCACACTACCAGTGTTCTTCTCAGAACGTTGTCTCC
TGTGCTAATGCTTTCAGGCTAGTTTTTTTTTTCCCTATTTCAGGTTTAGG
GTATCTGGATTTATGCTGAGTTCTCTCATTCACTTGAATATGAGATTTGT
AAGGTCAAAGTGTGCGCACGAGTGTGAGAGAGAGAGCGTGAGTAAACATT
CTTACAACTTATAAATTTACTTTCCGTACCTGCCCCCTTTTTTTCAATTT
TATCTCCACTTTACATTTATTACTATATTCAAATTATTATCCCTATCCAT
TTTTTTCTTTCTCTTTTATAACTCCTTATCATTTTTTTTTATTTGATATT
ACGACAAATAATAATATCTTTTTTATATTTATACAAACAACTATAATTAA
TTAAGTTATCAATACATATCCATTATAAAATACAAATCACCATCATATCC
TACCTCTTATTTTGTTCATATTCTCTACGATCGTTTTCCCTATACCTCTT

CCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCAGAGGTATCACAAATGGCTG
AGAAGAATTTAAAGAAATGTTCACCCTCCTTAGTCATCACAGAAATGCAA
ATAAAATGACCTTGAGATTCCACCTTATAGCAATTTATTGATATTTTCTT
AATATTGTTCAATGTTTGTACAAAAATTTAATATGAAGGAACAAAAGGAC
TGTCATTGCTCTCATTATTCTATCCATAAATATTCACAGAATAAGAAAAT
GTTGACTGGGCAGTGGTGGTATTTTTTTTTAATCCCAGCACTTAGAAGGC
AGAGTCAGGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAATGAG
TTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAGAAAAAGAAA
AAAAAAAAAGACAAAAAGGAAAAAAAAAAGAAAATGTGTTTTAAATAAAT
AACTCATAGTCAAAAACTTCTATTCTGCTATTTAACAGAATTATTACTAT
CTGTGTTTCTGTGTTAGGAAGTGATTCACTTTTCAACTATTCATTTCTCT
AATTATTACAAATTACCCTGCTATTCAAAAGAATGACCATATATTCTACC
TAAAAAATTATTCTTACACAAACAGTTCTATGTCTTGATTGATTTGTTCA
AAACTGTCTATGACACTAGA

Query= MSMg01no131_n12.g1 MSMg01no131_n12.g1 CHROMAT_FILE:
MSMg01no131_n12.g1 PHD_FILE: MSMg01no131_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:12 2005
         (645 letters)



>mm_chr5_57139143_57140187
          Length = 1045

 Score = 1158 bits (599), Expect = 0.0
 Identities = 635/655 (96%), Gaps = 16/655 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcaccagaggtatcacaaatggctgagaagaatttaaagaaatgttcaccctccttagtc 60
           ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 195 tcaccagaggtatcacaaatggctgagaagaatttaaagaaattttcaacctccttagtc 254

                                                                       
Query: 61  atcacagaaatgcaaataaaatgaccttgagattccaccttatagcaatttattgatatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atcacagaaatgcaaataaaatgaccttgagattccaccttatagcaatttattgatatt 314

                                                                       
Query: 121 ttcttaatattgttcaatgtttgtacaaaaatttaatatgaaggaacaaaaggactgtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttcttaatattgttcaatgtttgtacaaaaatttaatatgaaggaacaaaaggactgtca 374

                                                                       
Query: 181 ttgctctcattattctatccataaatattcacagaataagaaaatgttgactgggcagtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttgctctcattattctatccataaatattcacagaataagaaaatgttgactgggcagtg 434

                                                                       
Query: 241 gtggta-----tttttttttaatcccagcacttagaaggcagagtcaggcagatttctga 295
           |||| |          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtggcacaggc-----ttttaatcccagcacttagaaggcagagtcaggcagatttctga 489

                                                                       
Query: 296 gtttgaggccagcctggtctacagaatgagttccaggacagccagggctacacagagaaa 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gtttgaggccagcctggtctacagaatgagttccaggacagccagggctacacagagaaa 549

                                                                       
Query: 356 ccctgtctcagaaaaag-----aaaaaaaaaaaagacaaaaaggaaaaaaa-aaagaaaa 409
           |||||||||||||||||     ||||||||||||||||||||||||||||| ||||||||
Sbjct: 550 ccctgtctcagaaaaagaaaaaaaaaaaaaaaaagacaaaaaggaaaaaaagaaagaaaa 609

                                                                       
Query: 410 tgtgttttaaataaataactcatagtcaaaaacttctattctgctatttaacagaattat 469
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 610 tgtgttttaaataaataactcatagtcaaaaacttctattctgccatttaacagaattat 669

                                                                       
Query: 470 tactatctgtgtttctgtgttaggaagtgattcacttttcaactattcatttctctaatt 529
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tactatctgtgtttctgtgttaggaagtgattcacttttcaactattcatttctctaatt 729

                                                                       
Query: 530 attacaaattaccctgctattcaaaagaatgaccatatattctacctaaaaaattattct 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 attacaaattaccctgctattcaaaagaatgaccatatattctacctaaaaaattattct 789

                                                                  
Query: 590 tacacaaacagttctatgtcttgattgatttgttcaaaactgtctatgacactag 644
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 tacacaaacagttctatgtcttgattgatttgttcaaaactgtctatgacactag 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)