Query= MSMg01no132_a07.b1 MSMg01no132_a07.b1 CHROMAT_FILE:
MSMg01no132_a07.b1 PHD_FILE: MSMg01no132_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:25 2005
(647 letters)
>mm_chr5_84671742_84672788
Length = 1047
Score = 824 bits (426), Expect = 0.0
Identities = 438/442 (99%)
Strand = Plus / Minus
Query: 206 aggtcccatttattaattggtattttgttcagaaaattttcacttgtgccaatgtgtttg 265
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 aggtcccatttattaattgatattttgttcagaaaattttcacttgtgccaatgtgtttg 988
Query: 266 aggctatttctcactttctctctctctctctctttttagattcagtgtatctgtttttat 325
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 987 aggctatttctcactttctctctctctttctctttttagattcagtgtatctgtttttat 928
Query: 326 gttgaggtccttgatccatttgtacttgatcttggtacaaggagataaatatgggtttat 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 gttgaggtccttgatccatttgtacttgatcttggtacaaggagataaatatgggtttat 868
Query: 386 atttttcttctctgtgtttgtgttcttgtatgtgtttggtgcacacgtgcatatgtatat 445
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 867 atttttcttctctgtgtttctgttcttgtatgtgtttggtgcacacgtgtatatgtatat 808
Query: 446 ttcaaaggtgtattcttgagaatattgtcaggaatattgtttgatctctctttcactgta 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttcaaaggtgtattcttgagaatattgtcaggaatattgtttgatctctctttcactgta 748
Query: 506 ttctttgagactagatatctcaataaaactcagagttcatttatgtgggtggtgtcccag 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttctttgagactagatatctcaataaaactcagagttcatttatgtgggtggtgtcccag 688
Query: 566 cctgcttcatcaggcattcattctttagttttcaagtctggtctttcttctgtatatcag 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 cctgcttcatcaggcattcattctttagttttcaagtctggtctttcttctgtatatcag 628
Query: 626 gaatattaatccctgaaggtct 647
||||||||||||||||||||||
Sbjct: 627 gaatattaatccctgaaggtct 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_a07.g1 MSMg01no132_a07.g1 CHROMAT_FILE:
MSMg01no132_a07.g1 PHD_FILE: MSMg01no132_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:25 2005
(616 letters)
>mm_chr5_84521967_84522982
Length = 1016
Score = 1067 bits (552), Expect = 0.0
Identities = 607/648 (93%), Gaps = 36/648 (5%)
Strand = Plus / Plus
Query: 1 aactcctcttattcttcttatatgtttctttcactgtctctctttgtctctgagtctgtc 60
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 169 aacttctcttattcttcttatatgtttctttcactgtctctctttgtctctgagtcggtc 228
Query: 61 cctgtgtatcggtctatctgtatgtacctctctccctccatccatatcccaccattcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cctgtgtatcggtctatctgtatgtacctctctccctccatccatatcccaccattcacc 288
Query: 121 acacacacacacacac--------------------------------ttcaggcaatct 148
|||||||||||||||| ||||||||||||
Sbjct: 289 acacacacacacacacacacacacacacacacacacacacacacacacttcaggcaatct 348
Query: 149 attacgatgtgagtttacatttcacttgtaagaattacgtaaggttctttaggctaagaa 208
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 349 attacgatgtgagtttacatttcacttgtaagaattacttaaggttctttaggctaagaa 408
Query: 209 gaatacatgttagaatggaaatgtagattgcttttatgaagggctaggagaagaaggaaa 268
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 409 gaatacatgttagaatggaaatgtagtttgcttttatgaagggctaggagaagaaggaaa 468
Query: 269 taggaattactactcagtaagttttcatttgttcaggcatgattcctggaagttcaagaa 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 taggaattactactcagtaagttttcatttgttcaggcatgattcctggaagttcaagaa 528
Query: 329 atgtttgcacagcattttgctagtgataatgagctaaagtttgattgtttgtttgtttgt 388
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 atgtttgcacagcattttgttagtgataatgagctaaagtttgattgtttgtttgtttgt 588
Query: 389 ttgtttgtttgtttttggagggcagatctcatagtacatgcttttcattatattacaaat 448
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttgtttgttt----ttggagggcagatctcatagtacatgcttttcattatattacaaat 644
Query: 449 tgaatttgttgtttgttttttattttattttgttttgagaatatgcttttcattatatta 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tgaatttgttgtttgttttttattttattttgttttgagaatatgcttttcattatatta 704
Query: 509 caaattgaatttgttgtttgtttttttattttattttgttttgagaatagggttgggtat 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 caaattgaatttgttgtttgtttttttattttattttgttttgagaatagggttgggtat 764
Query: 569 cattttgcattttagctctactagaacttgctgtctagcatgctggcc 616
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 cattttgcattttagctctactagaacttgctgtctagcatgctggcc 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
