MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-133D21
Chromosome	5 (Build37)
Map Location	109,647,066 - 109,749,881
singlet/doublet	doublet
Overlap gene	EG231591, LOC667128, EG211223
Upstream gene	Ccdc18, Dr1, Pigg, Pde6b, Atp5k, Mfsd7, Pcgf3, LOC100042557, Cplx1, LOC100042571, Gak, Tmem175, Dgkq, Idua, Slc26a1, LOC100042616, Fgfrl1, LOC671564, 1810008K16Rik, EG627479, EG435864, EG667087, LOC100041615, V2r16, LOC545792, EG384219, Vmn2r12, LOC231589
Downstream gene	EG384220, EG636052, EG384221, LOC667159, LOC667171, Tpte2, EG667185, LOC671695, LOC636173, LOC624831, LOC100041734, LOC100042749, LOC667198, 4930522L14Rik, LOC667243, Plcxd1, Gtpbp6, LOC675812, Chfr, Golga3, D5Ertd585e, Pgam5, Pxmp2, Pole
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ccdc18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73254 MGI:1922974
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13486 MGI:1100515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pigg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433931 MGI:3576484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde6b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18587 MGI:97525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5k (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11958 MGI:106636
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mfsd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243197 MGI:2442629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcgf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69587 MGI:1916837
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042557 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 645 ESTs, 5 Proteins

name	Cplx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12889 MGI:104727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042571 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042571
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Gak (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231580 MGI:2442153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem175 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72392 MGI:1919642
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dgkq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110524 MGI:102918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Idua (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15932 MGI:96418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc26a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231583 MGI:2385894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042616 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042616
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	Fgfrl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116701 MGI:2150920
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671564 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671564
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	1810008K16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67366 MGI:1914616
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627479 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627479 MGI:3642986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	EG435864 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435864 MGI:3643093
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 29 Proteins

name	EG667087 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667087 MGI:3647958
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100041615 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041615
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	V2r16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22307 MGI:1316730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545792 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 4 Proteins pseudo : _no_value

name	EG384219 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384219 MGI:3643806
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	Vmn2r12 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627569
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	LOC231589 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:231589
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	EG231591 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231591 MGI:3649151
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 Proteins

name	LOC667128 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667128
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	EG211223 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211223 MGI:3649165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 Proteins

name	EG384220 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384220 MGI:3647194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 Proteins

name	EG636052 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:636052 MGI:3649028
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	EG384221 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384221 MGI:3647193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 Proteins pseudo : _no_value

name	LOC667159 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC667171 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Tpte2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57914 MGI:1889506
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667185 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667185 MGI:3646443
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC671695 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC636173 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:636173
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC624831 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 58 ESTs

name	LOC100041734 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042749 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042749
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC667198 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 185 ESTs, 6 Proteins pseudo : _no_value

name	4930522L14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78020 MGI:1925270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC667243 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667243
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Plcxd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:403178 MGI:2685422
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtpbp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107999 MGI:1306825
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675812 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 2 Proteins

name	Chfr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231600 MGI:2444898
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Golga3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269682 MGI:96958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D5Ertd585e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71782 MGI:1261856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgam5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72542 MGI:1919792
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pxmp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19301 MGI:107487
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pole (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18973 MGI:1196391
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037312 GeneID:73254 MGI:1922974
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 18 transcript_id : NM_028481.1

name	Dr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129880 GeneID:13486 MGI:1100515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : down-regulator of transcription 1 transcript_id : NM_026106.4

name	Pigg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486986 GeneID:433931 MGI:3576484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol glycan anchor biosynthesis, class G transcript_id : NM_001081234.1

name	Pde6b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930734 GeneID:18587 MGI:97525
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide transcript_id : NM_008806.2

name	Atp5k (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83715997 GeneID:11958 MGI:106636
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e transcript_id : NM_007507.2

name	Mfsd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803112 GeneID:243197 MGI:2442629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : major facilitator superfamily domain containing 7 transcript_id : NM_172883.2

name	Pcgf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802615 GeneID:69587 MGI:1916837
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polycomb group ring finger 3 transcript_id : NM_172716.3

name	LOC100042557 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254155 GeneID:100042557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 645 ESTs, 5 Proteins product : similar to ribosomal protein L34 transcript_id : XM_001478936.1

name	Cplx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542415 GeneID:12889 MGI:104727
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complexin 1 transcript_id : NM_007756.2

name	LOC100042571 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254157 GeneID:100042571
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042571 transcript_id : XM_001478967.1

name	Gak (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51317386 GeneID:231580 MGI:2442153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin G associated kinase transcript_id : NM_153569.1

name	Tmem175 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982620 GeneID:72392 MGI:1919642
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 175 transcript_id : NM_028223.2

name	Dgkq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39841022 GeneID:110524 MGI:102918
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol kinase, theta transcript_id : NM_199011.1

name	Idua (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382287 GeneID:15932 MGI:96418
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : iduronidase, alpha-L- transcript_id : NM_008325.2

name	Slc26a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543720 GeneID:231583 MGI:2385894
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 26 (sulfate transporter), member 1 transcript_id : NM_174870.2

name	LOC100042616 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254159 GeneID:100042616
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : hypothetical protein LOC100042616 transcript_id : XM_001479076.1

name	Fgfrl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16905100 GeneID:116701 MGI:2150920
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor receptor-like 1 transcript_id : NM_054071.1

name	LOC671564 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254116 GeneID:671564
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to ring finger protein 212 transcript_id : XM_001476621.1

name	1810008K16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71037400 GeneID:67366 MGI:1914616
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810008K16 gene transcript_id : NM_026109.2

name	EG627479 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375089 GeneID:627479 MGI:3642986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : predicted gene, EG627479 transcript_id : XM_892149.2

name	EG435864 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82899196 GeneID:435864 MGI:3643093
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 29 Proteins product : predicted gene, EG435864 transcript_id : XM_892161.1

name	LOC100041615 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254119 GeneID:100041615
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100041615 transcript_id : XM_001476691.1

name	V2r16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115529455 GeneID:22307 MGI:1316730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 2, receptor, 16 transcript_id : NM_009491.2

name	EG384219 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94375092 GeneID:384219 MGI:3643806
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : predicted gene, EG384219 transcript_id : XM_621684.3

name	EG231591 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82899096 GeneID:231591 MGI:3649151
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 Proteins product : predicted gene, EG231591, transcript variant 1 transcript_id : XM_621686.2

name	EG211223 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82899211 GeneID:211223 MGI:3649165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 Proteins product : predicted gene, EG211223 transcript_id : XM_142477.3

name	EG384220 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51711189 GeneID:384220 MGI:3647194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 Proteins product : predicted gene, EG384220 transcript_id : XM_357498.2

name	EG636052 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149254162 GeneID:636052 MGI:3649028
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG636052 transcript_id : XM_001479107.1

name	Tpte2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802359 GeneID:57914 MGI:1889506
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 transcript_id : NM_016715.3

name	LOC624831 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254164 GeneID:624831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 58 ESTs product : similar to LOC635138 protein transcript_id : XM_898489.3

name	LOC100041734 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254123 GeneID:100041734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to crooked legs CG14938-PB transcript_id : XM_001476915.1

name	LOC100042749 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254166 GeneID:100042749
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042749 transcript_id : XM_001479149.1

name	Plcxd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402312 GeneID:403178 MGI:2685422
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol-specific phospholipase C, X domain containing 1 transcript_id : NM_207279.1

name	Gtpbp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365016 GeneID:107999 MGI:1306825
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTP binding protein 6 (putative) transcript_id : NM_145147.3

name	LOC675812 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254168 GeneID:675812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 2 Proteins product : similar to zinc finger protein 605 transcript_id : XM_001479199.1

name	Chfr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377331 GeneID:231600 MGI:2444898
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : checkpoint with forkhead and ring finger domains transcript_id : NM_172717.2

name	Golga3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982329 GeneID:269682 MGI:96958
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi autoantigen, golgin subfamily a, 3 transcript_id : NM_008146.3

name	D5Ertd585e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789238 GeneID:71782 MGI:1261856
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 5, ERATO Doi 585, expressed transcript_id : NM_027922.1

name	Pgam5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349845 GeneID:72542 MGI:1919792
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoglycerate mutase family member 5 transcript_id : NM_028273.2

name	Pxmp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112421057 GeneID:19301 MGI:107487
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisomal membrane protein 2 transcript_id : NM_008993.2

name	Pole (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755123 GeneID:18973 MGI:1196391
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed), epsilon transcript_id : NM_011132.1

name	Ccdc18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037313 GeneID:73254 MGI:1922974
definition	GO_component : GO:0009279 - outer membrane (sensu Proteobacteria) [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence IEA] codon_start : 1 product : sarcoma antigen NY-SAR-41 protein_id : NP_082757.1

name	Dr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754097 CCDS:CCDS19509.1 GeneID:13486 MGI:1100515
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : down-regulator of transcription 1 protein_id : NP_080382.2

name	Pigg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486987 GeneID:433931 MGI:3576484
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] GO_function : GO:0051267 - CP2 mannose-ethanolamine phosphotransferase activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0008484 - sulfuric ester hydrolase activity [Evidence IEA] GO_process : GO:0006506 - GPI anchor biosynthesis [Evidence ISS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : phosphatidylinositol glycan, class G product : phosphatidylinositol glycan anchor biosynthesis, class G protein_id : NP_001074703.1

name	Pde6b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930735 CCDS:CCDS19510.1 GeneID:18587 MGI:97525
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0047555 - 3',5'-cyclic-GMP phosphodiesterase activity [Evidence IEA]; GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0009583 - detection of light stimulus [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : phosphodiesterase, cGMP, rod receptor, beta polypeptide; retinal degeneration 1; cGMP-phosphodiesterase beta-subunit product : phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide protein_id : NP_032832.2

name	Atp5k (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83715998 GeneID:11958 MGI:106636
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP synthase, H+ transporting, mitochondrial F1F0 complex, subunit e protein_id : NP_031533.2

name	Mfsd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370346 CCDS:CCDS19511.1 GeneID:243197 MGI:2442629
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : major facilitator superfamily domain containing 7 protein_id : NP_766471.1

name	Pcgf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044444 CCDS:CCDS19512.1 GeneID:69587 MGI:1916837
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : ring finger protein 3 product : polycomb group ring finger 3 protein_id : NP_766304.2

name	LOC100042557 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254156 GeneID:100042557
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478986.1

name	Cplx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542416 GeneID:12889 MGI:104727
definition	GO_component : GO:0031201 - SNARE complex [Evidence IDA] GO_function : GO:0005326 - neurotransmitter transporter activity [Evidence IMP]; GO:0019905 - syntaxin binding [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0030073 - insulin secretion [Evidence IMP]; GO:0016079 - synaptic vesicle exocytosis [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : complexin 1 protein_id : NP_031782.2

name	LOC100042571 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254158 GeneID:100042571
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479017.1

name	Gak (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51317387 CCDS:CCDS19513.1 GeneID:231580 MGI:2442153
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : cyclin G associated kinase protein_id : NP_705797.1

name	Tmem175 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982621 CCDS:CCDS19514.1 GeneID:72392 MGI:1919642
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC72392 protein_id : NP_082499.2

name	Dgkq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39841023 CCDS:CCDS19515.1 GeneID:110524 MGI:102918
definition	GO_function : GO:0004143 - diacylglycerol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007205 - protein kinase C activation [Evidence IEA] codon_start : 1 note : diacylglycerol kinase, delta (110 kDa) product : diacylglycerol kinase, theta protein_id : NP_950176.1

name	Idua (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680349 CCDS:CCDS19516.1 GeneID:15932 MGI:96418
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]; GO:0003940 - L-iduronidase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation function : a-L-iduronidase note : alpha-L-iduronidase product : iduronidase, alpha-L- protein_id : NP_032351.1

name	Slc26a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543721 CCDS:CCDS19517.1 GeneID:231583 MGI:2385894
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015108 - chloride transporter activity [Evidence IDA]; GO:0019531 - oxalate transporter activity [Evidence IDA]; GO:0008271 - sulfate porter activity [Evidence IEA]; GO:0015116 - sulfate transporter activity [Evidence IDA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IDA]; GO:0019532 - oxalate transport [Evidence IDA]; GO:0008272 - sulfate transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : sulfate anion transporter-1; solute carrier family 26, member 1 product : solute carrier family 26 (sulfate transporter), member 1 protein_id : NP_777359.2

name	LOC100042616 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254160 GeneID:100042616
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479126.1

name	Fgfrl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16905101 CCDS:CCDS19518.1 GeneID:116701 MGI:2150920
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0001571 - non-tyrosine kinase fibroblast growth factor receptor activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0008285 - negative regulation of cell proliferation [Evidence IDA] codon_start : 1 note : fibroblast growth factor receptor 5 product : fibroblast growth factor receptor-like 1 protein_id : NP_473412.1

name	LOC671564 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254117 GeneID:671564
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476671.1

name	1810008K16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71037401 CCDS:CCDS19519.1 GeneID:67366 MGI:1914616
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : glycoprotein 25L protein_id : NP_080385.2

name	EG627479 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375090 GeneID:627479 MGI:3642986
definition	codon_start : 1 product : similar to predicted gene, EG623734 protein_id : XP_897242.2

name	EG435864 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82899197 GeneID:435864 MGI:3643093
definition	codon_start : 1 product : similar to predicted gene, EG623734 protein_id : XP_897254.1

name	LOC100041615 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254120 GeneID:100041615
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476741.1

name	V2r16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115529456 GeneID:22307 MGI:1316730
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : vomeronasal organ family 2, receptor, 16 product : vomeronasal 2, receptor, 16 protein_id : NP_033517.2

name	EG384219 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94375093 GeneID:384219 MGI:3643806
definition	codon_start : 1 product : similar to predicted gene, EG623734 protein_id : XP_621684.3

name	EG231591 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82899097 GeneID:231591 MGI:3649151
definition	codon_start : 1 product : similar to predicted gene, EG623734 isoform 1 protein_id : XP_621686.2

name	EG211223 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82899212 GeneID:211223 MGI:3649165
definition	codon_start : 1 product : similar to predicted gene, EG623734 protein_id : XP_142477.3

name	EG384220 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51711190 GeneID:384220 MGI:3647194
definition	codon_start : 1 product : similar to predicted gene, EG623734 protein_id : XP_357498.2

name	EG636052 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149254163 GeneID:636052 MGI:3649028
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_001479157.1

name	Tpte2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980663 CCDS:CCDS19521.1 GeneID:57914 MGI:1889506
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : lymphocyte antigen 114; delta 1 product : thymic stromal-derived lymphopoietin, receptor protein_id : NP_057924.2

name	LOC624831 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94375045 GeneID:624831
definition	codon_start : 1 product : similar to LOC635138 protein protein_id : XP_903582.2

name	LOC100041734 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254124 GeneID:100041734
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476965.1

name	LOC100042749 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254167 GeneID:100042749
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479199.1

name	Plcxd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402313 GeneID:403178 MGI:2685422
definition	GO_function : GO:0004629 - phospholipase C activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : phosphatidylinositol-specific phospholipase C, X domain containing 1 protein_id : NP_997162.1

name	Gtpbp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956274 GeneID:107999 MGI:1306825
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA] codon_start : 1 note : pseudoautosomal GTP binding protein-like, like product : GTP binding protein 6 (putative) protein_id : NP_660129.1

name	LOC675812 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254169 GeneID:675812
definition	codon_start : 1 product : similar to zinc finger protein 605 protein_id : XP_001479249.1

name	Chfr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370050 CCDS:CCDS19522.1 GeneID:231600 MGI:2444898
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IMP]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0000278 - mitotic cell cycle [Evidence IMP]; GO:0000209 - protein polyubiquitination [Evidence IDA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IDA] codon_start : 1 exception : mismatches in translation product : checkpoint with forkhead and ring finger domains protein_id : NP_766305.1

name	Golga3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982330 GeneID:269682 MGI:96958
definition	GO_component : GO:0005793 - ER-Golgi intermediate compartment [Evidence IDA]; GO:0000139 - Golgi membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 note : Mea2/Golga3 product : Golgi autoantigen, golgin subfamily a, 3 protein_id : NP_032172.3

name	D5Ertd585e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789239 GeneID:71782 MGI:1261856
definition	codon_start : 1 product : hypothetical protein LOC71782 protein_id : NP_082198.1

name	Pgam5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037293 CCDS:CCDS19523.1 GeneID:72542 MGI:1919792
definition	codon_start : 1 exception : mismatches in translation product : phosphoglycerate mutase family member 5 protein_id : NP_082549.1

name	Pxmp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112421058 CCDS:CCDS19524.1 GeneID:19301 MGI:107487
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_process : GO:0007031 - peroxisome organization and biogenesis [Evidence IEA] codon_start : 1 note : peroxisomal membrane protein 2, 22 kDa product : peroxisomal membrane protein 2 protein_id : NP_033019.2

name	Pole (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755124 CCDS:CCDS19525.1 GeneID:18973 MGI:1196391
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : DNA polymerase epsilon; pol-epsilon product : DNA polymerase epsilon catalytic subunit protein_id : NP_035262.1

name	EG667087 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667087
definition	number : 7 pseudo : _no_value

name	EG667087 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667087
definition	number : 6 pseudo : _no_value

name	EG667087 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667087
definition	number : 5 pseudo : _no_value

name	EG667087 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667087
definition	number : 4 pseudo : _no_value

name	EG667087 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667087
definition	number : 3 pseudo : _no_value

name	EG667087 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667087
definition	number : 2 pseudo : _no_value

name	EG667087 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667087
definition	number : 1 pseudo : _no_value

name	Vmn2r12 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627569
definition	number : 6 pseudo : _no_value

name	Vmn2r12 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627569
definition	number : 5 pseudo : _no_value

name	Vmn2r12 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627569
definition	number : 4 pseudo : _no_value

name	Vmn2r12 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627569
definition	number : 3 pseudo : _no_value

name	Vmn2r12 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627569
definition	number : 2 pseudo : _no_value

name	Vmn2r12 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627569
definition	number : 1 pseudo : _no_value

name	LOC231589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:231589
definition	number : 6 pseudo : _no_value

name	LOC231589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:231589
definition	number : 5 pseudo : _no_value

name	LOC231589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:231589
definition	number : 4 pseudo : _no_value

name	LOC231589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:231589
definition	number : 3 pseudo : _no_value

name	LOC231589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:231589
definition	number : 2 pseudo : _no_value

name	LOC231589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:231589
definition	number : 1 pseudo : _no_value

name	LOC667128 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667128
definition	number : 1 pseudo : _no_value

name	EG384221 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384221
definition	number : 1 pseudo : _no_value

name	EG384221 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384221
definition	number : 2 pseudo : _no_value

name	EG384221 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384221
definition	number : 3 pseudo : _no_value

name	EG384221 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384221
definition	number : 4 pseudo : _no_value

name	EG384221 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384221
definition	number : 5 pseudo : _no_value

name	EG384221 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384221
definition	number : 6 pseudo : _no_value

name	EG384221 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384221
definition	number : 7 pseudo : _no_value

name	LOC667159 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667159
definition	number : 2 pseudo : _no_value

name	LOC667159 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667159
definition	number : 1 pseudo : _no_value

name	LOC667171 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667171
definition	number : 8 pseudo : _no_value

name	LOC667171 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667171
definition	number : 7 pseudo : _no_value

name	LOC667171 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667171
definition	number : 6 pseudo : _no_value

name	LOC667171 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667171
definition	number : 5 pseudo : _no_value

name	LOC667171 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667171
definition	number : 4 pseudo : _no_value

name	LOC667171 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667171
definition	number : 3 pseudo : _no_value

name	LOC667171 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667171
definition	number : 2 pseudo : _no_value

name	LOC667171 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667171
definition	number : 1 pseudo : _no_value

name	EG667185 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667185
definition	number : 2 pseudo : _no_value

name	EG667185 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667185
definition	number : 1 pseudo : _no_value

name	LOC671695 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671695
definition	number : 2 pseudo : _no_value

name	LOC671695 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671695
definition	number : 1 pseudo : _no_value

name	LOC636173 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636173
definition	number : 2 pseudo : _no_value

name	LOC636173 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:636173
definition	number : 1 pseudo : _no_value

name	LOC667243 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667243
definition	number : 1 pseudo : _no_value

name	LOC545792 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254161 GeneID:545792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 4 Proteins product : similar to survival motor neuron domain containing 1 pseudo : _no_value transcript_id : XR_034056.1

name	LOC667198 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254165 GeneID:667198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 185 ESTs, 6 Proteins product : similar to golgi autoantigen, golgin subfamily a, 7 pseudo : _no_value transcript_id : XR_034078.1

name	4930522L14Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149254125 GeneID:78020 MGI:1925270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : RIKEN cDNA 4930522L14 gene transcript_id : XR_035683.1

clone name	MSMg01-213H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538H19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-455H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-520M11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-133D21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-117N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-188D21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387D18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-127K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261J02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-525D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381G17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-464P05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-291P11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-354G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-391L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177D21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-133D21.T7 (MSMg01no133_d21.b1)	MSMg01-133D21.TJ (MSMg01no133_d21.g1)
ACC	AG340273	AG340274
length	691	687
length of high quality (start - end)	624 (66 - 689)	234 (121 - 354)
definition	CHROMAT_FILE: MSMg01no133_d21.b1 PHD_FILE: MSMg01no133_d21.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:48:00 2005	CHROMAT_FILE: MSMg01no133_d21.g1 PHD_FILE: MSMg01no133_d21.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:48:01 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	plural
Map location.	(109,749,420 - 109,749,881)	(109,647,066 - 109,647,283)
sequence	ATCAXXXXXXXXXXXXXXXXXXXXXXXXCTATTCCAAGAGGACCGCGGAA TTCAAAATATTCTGAAAAATATATGTTATGGCCACTCATCTTAGTTGCTT CCTAGAAGTTGGAGCTATGCCTTATTACTGAAAATACCATATATTTCAGG TATGGGACATGGAAATGCTGAGCCGGAACTAAACAGGAAACTTCCTCCCT GAAGAGTATCATTCAGCATAACTGAAGGGGTTATAAAATGCTTCCAAGAG AGAAAAGAAATTCCAAGTCCCACCAGGCTCTAAAACGGGTGGAACACCAC AAAGCCTAGAATGGCAAGATATATTGTACCATTTAATTGTGGTGAGCATA ACTTTGGGGAAACTATCACCTGTGTAATTGTCCTTAAGGCACTCAACAAA AAGGAAATTGTGTTTGACTGTTAACCTGTTGAGGTCCAGCCTCAGAATGA GGAGGGCCCTGACAAAGGGAAGAATGGGAGAGGTGCTGATTTAATGACTC CAGTCAGTAGTGGATGGGAGCTGTCAGTTCAAGTGCTCTCTCTTTTCCAA GGATTATATTCAATCTTCCTTCTTCTAATTTCTTCCTCCAGTCTTCTAGC TCTTTTCCTTCTCCCAACCAGAGTCTGAATCCAGTCTTATTTACTAAAGC TGCATCATCAAGTTGTTCATCATTATTAACAACTTTTTAGA	CCGATGATAGGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXAGTAATCCAAAAGAATATTTATGTGGCATC AGTTTTTCATTATATATCCATATATATATATATATATATATATATATATA TATATATATATAAAACCAAGAACACTGAATTGTATGCAGAGAGAAAGTAG GGTAAATCAAGAAAGAGTTTAATGAATATGAACAAAATATATTATATAAG ACTCTATGAAATTAATGAAATTGTCCTAAGTTTTAAAGAAAACGTGGAAC CCTCTATCCAATCCACATATCCACCTGCTTCTATAAAGGAGCTACCACAA TCACTTGTCTTCTCCTACCTCACCACCCTAGCATTCCTCTATTCTGAGGC AAAATGCCTCCACAGGATCAAGGACCATCCCTCCCACTAATGCCAGATAA GGCAATAGTCCACAGAAAAGGGGAAACTGGGAGGGGGAATAACATTTAAA GTGCAATAACTAAAATAGCCAATAAAAATATATAAAAATAGCTTGATTCT GGAGAAATATTTCTGTAAATGAATACATGTTATATTTCATTAGGCTATAA ATATGTTCACACAGAATCAGAAAATTCCTTGCTTTGCTTGTAGTCAAAAA TTATATATATATACATGCACATTATTATAAATTTAAT
quality values	Open. Hide. 7 7 8 8 9 9 10 21 16 30 24 18 16 17 22 26 22 33 33 33 29 37 43 39 23 21 10 9 9 9 8 6 8 8 8 8 11 11 10 13 11 10 10 10 15 28 37 31 35 35 31 31 31 31 31 29 21 17 10 10 10 9 9 9 9 15 21 26 33 33 33 28 33 36 36 36 36 38 53 53 42 42 53 53 53 53 53 50 50 50 53 47 51 51 47 47 50 68 68 68 68 68 68 68 68 51 51 51 50 50 50 68 68 68 68 57 57 57 57 57 48 48 48 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 50 51 51 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 43 47 52 52 52 62 62 62 62 62 62 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 62 62 68 68 68 68 68 68 68 68 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 52 62 62 62 62 59 59 59 57 59 59 59 59 59 59 59 68 68 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 52 54 54 59 59 59 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 57 57 57 59 57 57 57 57 57 50 50 50 50 50 50 57 57 59 57 59 59 57 54 54 57 57 57 57 59 57 57 57 57 54 54 54 57 57 57 57 57 68 68 68 68 59 59 57 57 57 59 57 57 57 48 47 47 43 46 59 59 54 54 54 54 54 54 54 54 54 54 48 59 59 59 59 57 57 48 48 48 48 57 57 59 59 57 57 59 59 48 48 47 59 41 41 30 30 25 24 22 28 37 37 37 37 41 46 48 48 48 48 48 48 48 48 48 48 59 57 57 57 48 48 48 59 59 59 57 57 57 57 54 54 54 57 57 48 48 42 42 37 42 43 48 43 47 47 42 47 48 48 48 48 57 57 57 50 50 50 59 59 59 59 59 41 41 41 36 35 41 39 37 36 36 47 43 39 37 37 41 43 37 39 36 47 39 43 43 48 48 48 57 47 48 48 48 43 43 59 47 47 43 43 43 59 59 59 59 59 59 59 43 37 36 41 32 32 39 39 39 33 37 37 37 33 32 30 27 25 35 31 36 41 37 37 37 27 15 18 9 9	Open. Hide. 6 6 8 8 12 6 6 6 6 8 6 6 6 8 8 10 19 21 37 39 33 33 33 33 33 41 47 27 27 9 9 9 9 9 10 9 9 10 10 17 17 18 21 28 26 22 12 12 14 26 21 33 30 21 15 9 9 9 12 11 13 13 15 13 12 13 23 15 20 14 16 14 21 28 36 35 35 35 35 22 22 11 10 10 23 24 57 57 57 47 42 42 40 37 37 37 36 50 50 50 53 53 53 44 50 31 31 28 19 19 10 12 11 12 9 9 6 6 8 8 8 15 28 59 59 47 47 48 48 48 59 59 57 57 57 57 57 57 57 57 59 59 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 48 50 50 50 47 47 54 57 59 57 57 57 40 35 29 29 48 42 41 41 41 42 42 47 54 54 59 59 59 59 57 57 57 57 54 54 54 50 50 43 44 44 50 57 50 54 54 57 57 57 57 57 57 57 50 43 35 35 37 43 52 52 52 57 57 57 57 57 57 57 54 54 54 57 57 57 57 57 57 57 57 57 57 57 57 52 52 57 57 57 57 57 57 59 57 57 57 57 57 50 54 54 57 57 57 47 50 50 47 47 57 57 57 57 57 57 57 57 57 68 57 57 54 57 57 57 57 57 57 57 57 48 47 47 57 57 57 57 59 59 59 59 68 68 57 57 57 57 57 47 43 36 37 32 41 30 30 24 30 33 42 47 54 54 54 48 57 57 57 57 48 48 48 48 57 57 57 57 57 57 57 57 48 50 50 39 34 24 18 12 12 11 15 12 12 12 13 19 21 28 13 13 13 13 12 12 11 12 12 13 13 23 30 28 41 40 40 43 46 47 47 57 59 59 59 59 59 59 59 57 57 57 57 57 48 48 47 59 43 48 48 48 48 59 59 48 48 43 44 37 26 26 15 14 14 15 15 15 13 13 13 15 23 32 42 47 57 57 57 57 43 43 32 36 23 20 20 20 27 27 35 42 42 44 44 57 57 43 43 43 57 59 50 43 43 43 28 28 27 20 20 20 41 41 47 43 35 33 33 38 43 43 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 52 43 43 35 43 43 35 32 32 27 20 20 27 38 43 43 44 42 31 29 29 33 33 28 38 28 38 38 50 41 41 32 43 43 43 43 37 37 35 43 42 43 57 57 50 43 41 44 44 39 44 39 43 43 43 43 41 41 28 28 28 40 37 39 39 44 44 44 42 42 35 35 35 39 41 43 41 47 46 42 36 28 28 25 25 25 36 36 28 35 41 39 39 37 30 24 24 19 19 32 23 25 33 33 33 39 33 39 33 36 25 28 28 28 28 28 28 28 28 28 28 25 17 17 21 19 28 22 17 11 10 10 15 21 26 30 14 14 14 16 10 9 10 10 19 23 25 22 22 17 17 19 30 31 42 42 38 39 39 39 37 30 30 28 34 34 30 22 22 12 12 12 12 11 11 10 9 9 19 19 28 28 26 22 28 28 27 34 36 34 34 25 22

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no133_d21.b1 MSMg01no133_d21.b1 CHROMAT_FILE:
MSMg01no133_d21.b1 PHD_FILE: MSMg01no133_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:00 2005
         (624 letters)



>mm_chr5_109748858_109749881
          Length = 1024

 Score =  886 bits (458), Expect = 0.0
 Identities = 461/462 (99%)
 Strand = Plus / Minus

                                                                        
Query: 163  gggttataaaatgcttccaagagagaaaagaaattccaagtcccaccaggctctaaaacg 222
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1024 gggttataaaatgcttccaagagagaaaagaaattccaagtcccaccaggctctaaaatg 965

                                                                        
Query: 223  ggtggaacaccacaaagcctagaatggcaagatatattgtaccatttaattgtggtgagc 282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964  ggtggaacaccacaaagcctagaatggcaagatatattgtaccatttaattgtggtgagc 905

                                                                        
Query: 283  ataactttggggaaactatcacctgtgtaattgtccttaaggcactcaacaaaaaggaaa 342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904  ataactttggggaaactatcacctgtgtaattgtccttaaggcactcaacaaaaaggaaa 845

                                                                        
Query: 343  ttgtgtttgactgttaacctgttgaggtccagcctcagaatgaggagggccctgacaaag 402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844  ttgtgtttgactgttaacctgttgaggtccagcctcagaatgaggagggccctgacaaag 785

                                                                        
Query: 403  ggaagaatgggagaggtgctgatttaatgactccagtcagtagtggatgggagctgtcag 462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784  ggaagaatgggagaggtgctgatttaatgactccagtcagtagtggatgggagctgtcag 725

                                                                        
Query: 463  ttcaagtgctctctcttttccaaggattatattcaatcttccttcttctaatttcttcct 522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724  ttcaagtgctctctcttttccaaggattatattcaatcttccttcttctaatttcttcct 665

                                                                        
Query: 523  ccagtcttctagctcttttccttctcccaaccagagtctgaatccagtcttatttactaa 582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664  ccagtcttctagctcttttccttctcccaaccagagtctgaatccagtcttatttactaa 605

                                                      
Query: 583  agctgcatcatcaagttgttcatcattattaacaacttttta 624
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604  agctgcatcatcaagttgttcatcattattaacaacttttta 563


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no133_d21.g1 MSMg01no133_d21.g1 CHROMAT_FILE:
MSMg01no133_d21.g1 PHD_FILE: MSMg01no133_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:01 2005
         (234 letters)



>mm_chr5_109646850_109647483
          Length = 634

 Score =  406 bits (210), Expect = e-118
 Identities = 216/218 (99%)
 Strand = Plus / Plus

                                                                       
Query: 17  tatatatatatatatatatatatataaaaccaagaacactgaattgtatgcagagagaaa 76
           ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 217 tatatatatatatatatgtatatatacaaccaagaacactgaattgtatgcagagagaaa 276

                                                                       
Query: 77  gtagggtaaatcaagaaagagtttaatgaatatgaacaaaatatattatataagactcta 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtagggtaaatcaagaaagagtttaatgaatatgaacaaaatatattatataagactcta 336

                                                                       
Query: 137 tgaaattaatgaaattgtcctaagttttaaagaaaacgtggaaccctctatccaatccac 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tgaaattaatgaaattgtcctaagttttaaagaaaacgtggaaccctctatccaatccac 396

                                                 
Query: 197 atatccacctgcttctataaaggagctaccacaatcac 234
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atatccacctgcttctataaaggagctaccacaatcac 434


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space:   140625
Effective search space used:   140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information