TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTTGAATTGTTCCCCATTTTTATCTATATGTTTGATTGTATACCACA
TGTGTACAGATGCCTACAAGGGGCAGCTGAAGGTGTGAAATCCTCTGGAG
CTGGAGTCACAAACTGTTGGAAACTTTCTTACTGGGTACTGGAAATTGAA
TTCAGGACATCTGGAAGAGCATCCAGTACTCTTAACCACTAAGCCAGCTC
TCCAGCCTCACATATACTGGTTTTAGTTGGCTTACATGTGAGTGTGCAGG
ATTTACAACACGCCCAGCCTCAAGTGCATTTTGGGTATGGAGCTCTCTTG
TAGTAGAATACTTGGCAGCACACACATACCTATCCTCCATCCTCTGCATG
TGAAGAAAACAACACAAGGACAAAACTAGAACTGCCATTCCTGGGCTGTG
ATGATGGTACTACAACTGGGAGGGTTGCAGGGAACTATTGAATGGCATCT
CTGCAAAAACATAAGCAAGTTTATGAAGTAGGCTCCTATGTGTGTGAATT
TCTTCAGTGCCTTTCTCTGGCTCCTGGCTCTTGCCTTCCCTTTCTCTCCC
TCACTGCATCCAAGTCCCTTAGGAAGCTTGGATTCCATCAACATCATCCA
CATTTCAAAATGTGTTCTCAATTTTGCAGTCCACTTG

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCTGATTAGATCTGTACCCCATTTAAAAA
ACTTTTCATTGATATTTTGTGAATTTCATATCATGCACACCAATTTCACT
CATCTTTCATCCCTTAATATCAGCCCTCTATCTTTGCAACCCTCCCTTAA
ATAAAAGAAGTTAGAATAACAACAACAACAACAACAACAACAACAACATC
TTGTCATCAAAGTTTTACTGTGCCACAATGTGTCACACCACACAGTACAC
CATTTTATCCACACATTTTTCCTTGCTAAGGTTCCTTGCAATTAGTTCTT
GGTCTTCTCCAAGTCCCCAGGCTTCTGCTATACTCTCTGTTCTGGATCCT
CACAGGGACTCCTCTCAGACATTCCGATGTTTTCCTGTGTCATAGAGATC
CTGCAGTTTTGGGTCTTAGAGGAACAGCCCTTTCTTGAGCTCCAGTAGTT
CACAGATGGAGTAGATGTTTGGACAGGGATCTGGGCCTAGGAGGTAGCTG
AGTTGGTCACCCAGCCAGCTCTTTCTCACTCTCACAAGCAGTGCATGCAC
TGCCCACTCTTCCCCGAATAGCTCACCTAATGATACATTTGTTTTCTGTG
TCCAATTCTTTGTATGTGATCAGAAATATAAATCCT

Query= MSMg01no135_b02.b1 MSMg01no135_b02.b1 CHROMAT_FILE:
MSMg01no135_b02.b1 PHD_FILE: MSMg01no135_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:05 2005
         (644 letters)



>mm_chr5_18650474_18651518
          Length = 1045

 Score = 1104 bits (571), Expect = 0.0
 Identities = 610/623 (97%), Gaps = 3/623 (0%)
 Strand = Plus / Minus

                                                                        
Query: 24   ccatttttatctatatgtttgattgtataccacatgtgtacagatgcctacaaggggcag 83
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 ccatttttatttatatgtttgattgtataccacatgtgtacagatgcctacaaggggcag 979

                                                                        
Query: 84   ctgaaggtgtgaaatcctctggagctggagtcacaaactgttggaaactttcttactggg 143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978  ctgaaggtgtgaaatcctctggagctggagtcacaaactgttggaaactttcttactggg 919

                                                                        
Query: 144  tactggaaattgaattcaggacatctggaagagcatccagtactcttaaccactaagcca 203
            |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918  tactagaaattgaaatcaggacatctggaagagcatccagtactcttaaccactaagcca 859

                                                                        
Query: 204  gctctccagcctcacatatactggttttagttggcttacatgtgagtgtgcaggatttac 263
            ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 858  gctttccagcctcacatacactggttttagttggcttacatgtgagtgtgcaggatttac 799

                                                                        
Query: 264  aacacgcccagcctcaagtgcattttgggtatggagctctcttgtagtagaatacttggc 323
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798  aacactcccagcctcaagtgcattttgggtatggagctctcttgtagtagaatacttggc 739

                                                                        
Query: 324  agcacac-acatacctatcctccatcctctgcatgtgaagaaaacaacacaaggacaaaa 382
            ||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738  agcacacaaaagacctatcctccatcctctgcatgtgaagaaaacaacacaaggacaaaa 679

                                                                        
Query: 383  ctagaactgccattcctgggctgtgatgatggtactacaactgggagggttgcagggaac 442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678  ctagaactgccattcctgggctgtgatgatggtactacaactgggagggttgcagggaac 619

                                                                        
Query: 443  tattgaatggcatctctgcaaaaacataagcaagtttatgaagtaggctcctatgtgtgt 502
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 618  tattgaatggcatctctgcaagaacataagcaagtttatgaagtaggctcctatgtgtgt 559

                                                                        
Query: 503  gaatttcttcagtgcctttctctggctcctggctcttgccttccctttctctccctcact 562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558  gaatttcttcagtgcctttctctggctcctggctcttgccttccctttctctccctcact 499

                                                                        
Query: 563  gcatccaagtcccttagga-agcttggattccatcaacatcatccacatttcaaaatgtg 621
            ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 498  gcatccaagtcccttaggaca-cttggattccatcaacatcatccacatttcaaaatgtg 440

                                   
Query: 622  ttctcaattttgcagtccacttg 644
            |||| ||||||||||||||||||
Sbjct: 439  ttcttaattttgcagtccacttg 417


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space:   656190
Effective search space used:   656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)