Query= MSMg01no135_f19.b1 MSMg01no135_f19.b1 CHROMAT_FILE:
MSMg01no135_f19.b1 PHD_FILE: MSMg01no135_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:28 2005
(668 letters)
>mm_chr5_130429091_130430159
Length = 1069
Score = 1249 bits (646), Expect = 0.0
Identities = 657/661 (99%), Gaps = 1/661 (0%)
Strand = Plus / Plus
Query: 9 gaattcagagcttgccacttccagctagtgtagcccagtagtctcctgtctctgggttgc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcagagcttgccacttccagctagtgtagcccagtagtctcctgtctctgggttgc 268
Query: 69 aggggcctgccatacttgcatatctttgtcatgtgttctcagcagagaaagcattgcaaa 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aggggcctgccatacttgcatatctttgtcatgtgttctcagcagagaaagcattgcaaa 328
Query: 129 tgctctgtctactgccccacctccccagattcacttccaagttctgatagtgtaaactaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgctctgtctactgccccacctccccagattcacttccaagttctgatagtgtaaactaa 388
Query: 189 tattgttcacccttctactttattttaaaatgtcctgcaagaacttgctttagttttttg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tattgttcacccttctactttattttaaaatgtcctgcaagaacttgctttagttttttg 448
Query: 249 gaaaacatctc-aaaagataagaaagaagtatttcggtaacctgtagttatgaacagtgc 307
||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 449 gaaaacatctcaaaaagataagaaagaagtatttcggtatcctgtagttgtgaacagtgc 508
Query: 308 acacactatgacagagtgtaagaaagagcgtgccacctctctgaagatgtgtcattttcc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 acacactatgacagagtgtaagaaagagcgtgccacctctctgaagatgtgtcattttcc 568
Query: 368 aaatccagccctacgcgcctccttgttctcctttccatatgtttacatcgtctgtactat 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aaatccagccctacgcgcctccttgttctcctttccatatgtttacatcgtctgtactat 628
Query: 428 ttagttgtgatagttttgtacaagctcactgaaggagtgctagggtaggcttggtgtgcg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ttagttgtgatagttttgtacaagctcactgaaggagtgctagggtaggcttggtgtgcg 688
Query: 488 agcttaacttgtgctgggctagaggatcttagaacctgcagaaatagtgagaacttgttt 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 agcttaacttgtgctgggctagaggatcttagaacctgcagaaatagtgagaacttgttt 748
Query: 548 caaaaaaagaaaaggaaaaaagctattccatagctattgcattanaaattatgaattcac 607
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 749 caaaaaaagaaaaggaaaaaagctattccatagctattgcattaaaaattatgaattcac 808
Query: 608 atactgatggatctcttgtggttcgtgttgttactatatattgaggcagggttttgcttt 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 atactgatggatctcttgtggttcgtgttgttactatatattgaggcagggttttgcttt 868
Query: 668 a 668
|
Sbjct: 869 a 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space: 696822
Effective search space used: 696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_f19.g1 MSMg01no135_f19.g1 CHROMAT_FILE:
MSMg01no135_f19.g1 PHD_FILE: MSMg01no135_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:29 2005
(249 letters)
>mm_chr5_130588679_130589327
Length = 649
Score = 456 bits (236), Expect = e-133
Identities = 245/248 (98%)
Strand = Plus / Minus
Query: 1 tttttattgctattgtttatgatttgaacatctgagagatatagaaaattttatctgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttttattgctattgtttatgatttgaacatctgagagatatagaaaattttatctgaag 261
Query: 61 cttccttcctgtaattctactgacagttatgattaaattaagttttcataaagtgacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cttccttcctgtaattctactgacagttatgattaaattaagttttcataaagtgacaag 201
Query: 121 tttttaaatattaaaatttttaattattatttttgtattatgtgtatgggtgttttcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tttttaaatattaaaatttttaattattatttttgtattatgtgtatgggtgttttcttg 141
Query: 181 catgcatgtctatgtattacatgtgtggttatgcacaaagagtcataagagagcatcgga 240
|||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||
Sbjct: 140 catgcatgtctatgtattacatgtgtggttgtgcacaaagagtcagaagagagcattgga 81
Query: 241 gcctctga 248
||||||||
Sbjct: 80 gcctctga 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
