Query= MSMg01no137_o03.b1 MSMg01no137_o03.b1 CHROMAT_FILE:
MSMg01no137_o03.b1 PHD_FILE: MSMg01no137_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:44 2005
(480 letters)
>mm_chr5_69367732_69368607
Length = 876
Score = 816 bits (422), Expect = 0.0
Identities = 461/476 (96%), Gaps = 4/476 (0%)
Strand = Plus / Minus
Query: 5 gaattctgttgctacccaagtcttaagtttctttggaggtattaggttgcttccttattt 64
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 493 gaattctgttgctacagaagtcttaagtttctttggaggtattaggttgctacctta--- 437
Query: 65 gttcaatcatttttatcattacttttctttttccctatctgacagatcatttgcttaaaa 124
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 436 -ttcaatcatttttatcattacttttctgtttccctatctgacagatcatttgcttaaaa 378
Query: 125 caattaacacttttaaaaagtctttatcccatggatatgccctagttgttgaagaggtac 184
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 377 taattaacactttttaaaagtctttatcccatgggtatgccctagttgttgaagaggtac 318
Query: 185 attgtgatgtctatgatgggtgctttaagaggcttccatgcaacttgtgcagcttttatc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 317 attgtgatgtctatgatgggtgctttaagaggcttccatgcaacttgtgcagctcttatc 258
Query: 245 aaaattggacacatctatggatctagctatatgactagaagtccaattgcattcctcatt 304
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaaattgaacacatttatggatctagctatatgactagaagtccaattgcattcctcatt 198
Query: 305 cccatttctatgctgggattttgtctagcttgggcttgcactggttttgtgcatgctttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cccatttctatgctgggattttgtctagcttgggcttgcactggttttgtgcatgctttc 138
Query: 365 ataatcggtgtgagttcataatgtgtagctgccctgctgtgtccagaaaatactatttcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ataatcggtgtgagttcataatgtgtagctgccctgctgtgtccagaaaatactatttcc 78
Query: 425 tcatagtaacccactgcctctggtgtcttataaactttctccctcctcttctacca 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 77 tcatagtaacccactgcctctggtgtctgataaactttctccctcctcttctacca 22
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 876
Length adjustment: 10
Effective length of query: 470
Effective length of database: 866
Effective search space: 407020
Effective search space used: 407020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_o03.g1 MSMg01no137_o03.g1 CHROMAT_FILE:
MSMg01no137_o03.g1 PHD_FILE: MSMg01no137_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:44 2005
(392 letters)
>mm_chr5_69287782_69288573
Length = 792
Score = 735 bits (380), Expect = 0.0
Identities = 388/392 (98%), Gaps = 3/392 (0%)
Strand = Plus / Plus
Query: 1 acatttaggtattctgtaagaaatggagacagacatgaattgtattggttcagattcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 acatttaggtattctgtaagaaatggagacagacatgaattgtattggttcagattcttt 263
Query: 61 tggtaattttacttaagtgctagtatataataataataataataataataataatagtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 264 tggtaattttacttaagtgctagtatataataataataataataataataata---gtaa 320
Query: 121 taataatagctaataatataagacagaatatataaagctaccatcatggccattcctgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taataatagctaataatataagacagaatatataaagctaccatcatggccattcctgta 380
Query: 181 aatcaagtattttggagagaaaagctggaggatcactagctaaagctcgttctgagcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcaagtattttggagagaaaagctggaggatcactagctaaagctcgttctgagcttt 440
Query: 241 ataatgagttctaggccagcctgggctatatgagaagcgataggatgtgaactataaaaa 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatgagttcaaggccagcctgggctatatgagaagcgataggatgtgaactataaaaa 500
Query: 301 ctattgtaatatttatggtaatataagagaattttttaaaaatgtacaattcctaacttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctattgtaatatttatggtaatataagagaattttttaaaaatgtacaattcctaacttt 560
Query: 361 tagatttatttcaaagctaatgaagataaaga 392
||||||||||||||||||||||||||||||||
Sbjct: 561 tagatttatttcaaagctaatgaagataaaga 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
