Query= MSMg01no140_e11.b1 MSMg01no140_e11.b1 CHROMAT_FILE:
MSMg01no140_e11.b1 PHD_FILE: MSMg01no140_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:57 2005
(622 letters)
>mm_chr5_47864577_47865600
Length = 1024
Score = 1174 bits (607), Expect = 0.0
Identities = 617/621 (99%), Gaps = 4/621 (0%)
Strand = Plus / Minus
Query: 5 gaattcttct--atttcaacgtaagctctgcagttt-aaacacagactaggacagtcaag 61
|||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 824 gaattcttctaaattt-aacgtaagctctgcagtttaaaacacagactaggacagtcaag 766
Query: 62 gcacagcactcttcttcaactctggactttgcttttctctttcctctcaatgtatggaag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gcacagcactcttcttcaactctggactttgcttttctctttcctctcaatgtatggaag 706
Query: 122 atactggtgatgcgatgtgactttaaaataatttagaaaataaccagaaccaaaatgcga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 atactggtgatgcgatgtgactttaaaataatttagaaaataaccagaaccaaaatgcga 646
Query: 182 gtgcattagtttttattccttatacttttctacaaaacccacaagtctaagtgttattat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gtgcattagtttttattccttatacttttctacaaaacccacaagtctaagtgttattat 586
Query: 242 gtctctttaggacagaactgaaggtggctgagaacaatagggtttagatttgctaagaaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtctctttaggacagaactgaaggtggctgagaacaatagggtttagatttgctaagaaa 526
Query: 302 acctggttcagggggcacaagcaacctgtacctgctctcagggtattaaatggaagatgt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 acctggttcagggggcacaagcaacctgtacctgctctcagggtattaaatggaagatgt 466
Query: 362 ttgaggtcagatctttgtgtctccaaaattcattctcttgctccaaaaacctccaggttc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ttgaggtcagatctttgtgtctccaaaattcattctcttgctccaaaaacctccaggttc 406
Query: 422 cttctttaccacctccatggggatatacaagtcagtcatgtctgtgacaaaggacataga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cttctttaccacctccatggggatatacaagtcagtcatgtctgtgacaaaggacataga 346
Query: 482 caatctgtggtgagctcttttccaagaaatatttgggtagaggaagattcgcttttctcc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 caatctgtggtgagctcttttccaagaaatatttgggtagaggaagattcgcttttctcc 286
Query: 542 aggcatgactggtctttgacaacttgtggaactgaattttataaaatagcctattaagtt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aggcatgactggtctttgacaacttgtggaactgaattttataaaatagcctattaagtt 226
Query: 602 tcactttcatatatttacata 622
|||||||||||||||||||||
Sbjct: 225 tcactttcatatatttacata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1024
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1014
Effective search space: 620568
Effective search space used: 620568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_e11.g1 MSMg01no140_e11.g1 CHROMAT_FILE:
MSMg01no140_e11.g1 PHD_FILE: MSMg01no140_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:57 2005
(359 letters)
>mm_chr5_47736234_47736992
Length = 759
Score = 600 bits (310), Expect = e-176
Identities = 337/346 (97%)
Strand = Plus / Plus
Query: 11 actcctgtgcaaagccagatgtggtggcatgtgctagtaatatctatagtgaagaaacgg 70
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 211 actcctgtgcaaagccagatgtggtggcatgtgctagtaatatctatagtgaagaaacag 270
Query: 71 aaaccggaggattcttggagttggatggccacctagccaaccatacaaaaaacaagctgc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaaccggaggattcttggagttggatggccacctagccaaccatacaaaaaacaagctgc 330
Query: 131 tgcttccaattagatgactattttcaagaactaaagtggctatatcctatggaacagcat 190
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 331 tgcttccaattagatgactattttcaagaagtaaagtggctatatcctatggaacagcat 390
Query: 191 ctgaatgtggacctttgcgtctccatatacatatgtgcacagttgcacgggcacctgcat 250
||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 391 ctgaatgtggaccattgcgtctccatatacatatgagcacagttgcacgagcacctgcat 450
Query: 251 atacatctgttcttatccaaataaggaagaaattcaaaaatggatggaaggaaggaagga 310
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 atacatctgttcttattcaaataaggaagaaattcaaaaatggatggaaggaaggaagga 510
Query: 311 aggaaggaagaaaggaaggaaggaaggaaggaaggaaggaaggaag 356
|||||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 511 aggaaggaaggaaggaaggaaggaaggatggaaagaaggaaggaag 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
