TXXXXXXXXXXXXXXXXXXXXXXXCTATTTCGAGAGAAGCCGCGGAATTC
TTTCAGAATTCCCTAGGTTATTTCTTACTTATTTATTCATTTATTTTGAA
TTTTGAAATAACCTTTTAAACTTGTGCAAAAAAAAAGCCAAATATACAAC
AAAACAAGAACAACAGCAGCAACAACAAACCCCAGTGACTTTTTTTAACT
GACAGTCTAATCAGCCTGGGGAAACACAGACACTTTACCAACCCCAAAAC
AATGGAGGAAAATGGAACGCCTTTCATTCATTTAGGCTGCCTTTCACTTT
TTTCAACAGCAATTGTTTTCTAAGTGCAAAGTTTACACTTCATTTATTGA
GGTTATTGCTAGATTTTTTTTTACCTTGGTTTTCATCGTTTACAATGACT
TGTTTTCTGTTCATGGCTACTGCATGGGAATGTATCTGATTTCTTTGAAT
GGAAACCCTCGATACTAGCCAATTGGGAGTTAAACAAATTAAATGATGAT
GATGTAAAGACATGGGCTGCTCCCTGGTGCAGGATCTTAGTGGCATCCTC
TTGTAAATGCCTTTATCTGTATCTCCTTAGTATCTTGAAATTAGTCACCC
CTGAGAATAGGTAGCCCACATTTATAGATGTTATTAATCAGCCTTCTTAG
AGATGGATGCCAAACTCTAATGACCTTGTTCGATATATGAGTTTGGTTTT
GAGCGCTCTCTTTTATTGA

GAAAGTGGGGTAGGGCTGGGTGTCGGGTGCTGTGTTGCTTAAAAAGGGGG
GGGGGCGGTGGGGTGGTTGTTCTCCTCGCTNCGCGGCTTCCCCGCTCCCC
GGGTTCTTTGTTTTTTGTNTCTGGCTCCGCTGTCCCCTCGCCTTGGGGCT
GCGGGCGTTTTTTCCTCCTTATATGTACGTGTCTCTCCTTCCTTTTGCCC
CCACTTCTATTCTTGATTTAGCCCTTGCCCCTCGGTGCGTGTCTTTTCTT
AGACTTGTACGTGCGTGGGTGTTGGCGCATGTGTCTGGGTGGTGGGGGGG
GTTGCGGCGCGGGGTGGCGTTGTTGGTGTGCGGGATAGTGGTCGTGATGG
TTGGTGGGTGAGAGGGGGAGATGGTGTGTAGTGGATGGTGGTGTGTTTGA
GTGCCGTCCGCTTCTACGCTCTATCTTTTCTTTGTATATCCTGAACTGCA
TATATCTTGTTTTTCTGATATCTTAGTTTCCTCTCTCTATCATATAAATG
TGGTGATCGTCCGCACCTGCCGGTGTATATTTGTGCGGCGCTATGTGCTG
CTTGTTGTTGCGGGGGCCTACGCGCCCCACCCGGGTGTAGTGAGTTCGCG
CGTAAAGGAGCTTATCTCGCTCGCCGCGGGCGCCGGTGTGTGTATTGAAT
TTCGCCGCCGCCGCGTGGGTTGGTGGCGCTGGCGATTGCTACGTGTGTGC
GGCGAGAGGTATAAGAGGCGAGACCTAGCATAGCTAATAGTATTATGAGG
AGCGCAGTATGAGTAGTAGAGGAACGACGAAGAAACTAAACAGAGATGCA
ATACACAACAACATTAGTATAACCGACACGGGAGTGATATGCATGAAACG
GATGACAGCACAGACATGTTACAACCTATTTAATCACACAACGAGTATCG
TGCGTGGTAGGCCAACGATGCTTGTCTGGTAGCTGACTTGCGGACCGCGC
AGCCCAACTCAAGATACATGGGGCGATTAGAGGTTGACATAGAAATGTTA
GGAGATGGTATGGGAGTGACGAGAAGGTGGGTGTGTCGAAGTGGGGTGGT
GATAGTGGAGTGGCTACGGATAGTGTTCG

Query= MSMg01no140_p06.b1 MSMg01no140_p06.b1 CHROMAT_FILE:
MSMg01no140_p06.b1 PHD_FILE: MSMg01no140_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:51 2005
         (508 letters)



>mm_chr5_103347820_103348732
          Length = 913

 Score =  938 bits (485), Expect = 0.0
 Identities = 507/519 (97%), Gaps = 11/519 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggttatttcttacttatttatt----catttattttgaattttgaaataaccttttaaac 56
           ||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||
Sbjct: 195 ggttatttcttacttatttatttattcatttattttgaattttgaaataaccttttaaac 254

                                                                       
Query: 57  ttgtgcaaaaaaaaa--gccaaatatacaacaaaacaagaacaacagcagcaacaacaaa 114
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttgtgcaaaaaaaaaaagccaaatatacaacaaaacaagaacaacagcagcaacaacaaa 314

                                                                       
Query: 115 ccccagtgactttttttaactgacagtctaatca----gcctggggaaacacagacactt 170
           ||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||
Sbjct: 315 ccccagtgactttttttaactgacagtctaatcaaccagcctggggaaacacagacactt 374

                                                                       
Query: 171 taccaaccccaaaacaatggaggaaaatggaacgcctttcattcatttaggctgcctttc 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 taccaaccccaaaacaatggaggaaaatggaacgcctttcattcatttaggctgcctttc 434

                                                                       
Query: 231 acttttttcaacagcaattgttttctaagtgcaaagtttacacttcatttattgaggtta 290
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 435 acttttttcaacagcaattgttttcaaagtgcaaagtttacacttcatttattgaggtta 494

                                                                       
Query: 291 ttgctagattttttttt-accttggttttcatcgtttacaatgacttgttttctgttcat 349
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttgctagattttttttttaccttggttttcatcgtttacaatgacttgttttctgttcat 554

                                                                       
Query: 350 ggctactgcatgggaatgtatctgatttctttgaatggaaaccctcgatactagccaatt 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ggctactgcatgggaatgtatctgatttctttgaatggaaaccctcgatactagccaatt 614

                                                                       
Query: 410 gggagttaaacaaattaaatgatgatgatgtaaagacatgggctgctccctggtgcagga 469
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gggagttaaacaaattaaatgatgatgatgtaaagacatgggctgctccctggtgcagga 674

                                                  
Query: 470 tcttagtggcatcctcttgtaaatgcctttatctgtatc 508
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tcttagtggcatcctcttgtaaatgcctttatctgtatc 713


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 913
Length adjustment: 10
Effective length of query: 498
Effective length of database: 903
Effective search space:   449694
Effective search space used:   449694
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)