Query= MSMg01no142_m07.b1 MSMg01no142_m07.b1 CHROMAT_FILE:
MSMg01no142_m07.b1 PHD_FILE: MSMg01no142_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:52 2005
(637 letters)
>mm_chr5_80618261_80619298
Length = 1038
Score = 1170 bits (605), Expect = 0.0
Identities = 623/629 (99%), Gaps = 2/629 (0%)
Strand = Plus / Plus
Query: 11 aacaaaaaagcaaacaatggaaatttagctcaaatacactattgaatattattcatgtgt 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aacaaaaaagcaaacaatggaaatttagctcaaatacactattgaatattattcatgtgt 269
Query: 71 aaacaaaaatgaaattatgagatttacaatttaatagatggtaattttttctttctgtag 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaacaaaaatgaaattatgagatttacaatttaatagatggtaattttttctttctgtag 329
Query: 131 ataccgcaagaaaaaaaaatcatattatgtgagacaactgagtcagaacattacattttg 190
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 330 ataccgcaagaaaaaaaaatcatattatgtgagacaaatgagtcagaacattacattttg 389
Query: 191 gaatatatatttatatacaaatacacatagaaatgcagcacttattaagaaaaagaggcc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaatatatatttatatacaaatacacatagaaatgcagcacttattaagaaaaagaggcc 449
Query: 251 ataaatttgaagtagactaggcacatatacttggaagtgttcagagggaggaaagggacg 310
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 450 ataaatttgaagtagactaggcacatatacatggaagtgttcagagggaggaaagggacg 509
Query: 311 agacagatgctgtaattaaattataaactcaaaaataaaaa-gtcattaaagaaaagaat 369
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 510 agacagatgctgtaattaaattataaactcaaaaataaaaaagtcattaaagaaaagaat 569
Query: 370 catccaaaaaagataaaaatacaactaagctgtttgacatgcataagaaaaaaaaaa-gc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 570 catccaaaaaagataaaaatacaactaagctgtttgacatgcataagaaaaaaaaaaagc 629
Query: 429 ctttatttcacttctaaaggttctcattttcatttcaattttgactctcctctctacatt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 630 ctttatttcacttctaaaggttctcattttcatttcaattttgactctcctctctacttt 689
Query: 489 cctatatccatcttggcttttaggatctgaacagaaccttcctatactttctactcagaa 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 cctatatccatcttggcttttaggatctgaacagaaccttcctatactttctactcagaa 749
Query: 549 tgtcccagggtttctctagtgtgctgcaagtcatacattccctgcaacttattggaaaaa 608
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 750 tgtcccagggtttctctagtgtgctgcaagtcatacattccctgcaacttaatggaaaaa 809
Query: 609 tgttccaacacatgcccagcctactcaca 637
|||||||||||||||||||||||||||||
Sbjct: 810 tgttccaacacatgcccagcctactcaca 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no142_m07.g1 MSMg01no142_m07.g1 CHROMAT_FILE:
MSMg01no142_m07.g1 PHD_FILE: MSMg01no142_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:52 2005
(627 letters)
>mm_chr5_80770311_80771337
Length = 1027
Score = 613 bits (317), Expect = e-179
Identities = 344/353 (97%)
Strand = Plus / Minus
Query: 1 ggtgaaacaatttgtacaattgatgttaaattaagtgccatgttttgtgctcataggttt 60
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 353 ggtgaaacaatttgtacaatttatgttaaattaagtgccatgttttgtactcataggttt 294
Query: 61 atcaagatttcctatgctcttctctagttgtcttgagatttttatctacttcactttttc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 293 atcaagatttcctatgctcttctctagttgtcttgagatttttacctacttcactttttc 234
Query: 121 tttaatatgatttggaggatggtgtcagaaatctatctgtgacttttttatttgctgtga 180
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 233 tttaatatgatttggaggatggtgtcagaaatctatctataacttttttatttgctgtga 174
Query: 181 taaaaattccagagaaaggtatcctatggggaaaatttccttacttggctgaggtctcca 240
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 173 taaaaattccagagaaaggtatcctatggggaaaaattccttatttggctgaggtctcca 114
Query: 241 gggtgtattctgtacatatggtggcaataacttcaggcaaatggtcacacttcatccact 300
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 113 gggtgtattctgtacttatggtggcaagaacttcaggcaaatggtcacacttcatccact 54
Query: 301 ctgattccaaagagtaataaacacttgtgctcagctcactttctcctttttat 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ctgattccaaagagtaataaacacttgtgctcagctcactttctcctttttat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
