Query= MSMg01no143_m06.b1 MSMg01no143_m06.b1 CHROMAT_FILE:
MSMg01no143_m06.b1 PHD_FILE: MSMg01no143_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:24 2005
(340 letters)
>mm_chr5_127508844_127509583
Length = 740
Score = 561 bits (290), Expect = e-164
Identities = 326/338 (96%)
Strand = Plus / Minus
Query: 3 cttctggcattgttttttctaagttaacctcagtttggatgtagtccccacagctccttc 62
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cttctggcattgttctttctaagttaacctcagtttggatgtagtccccacagctccttc 481
Query: 63 ccttcttattcctaggtctgaaattctgctatcagggtcctaacctcaacccttacttgg 122
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 480 ccttcttattcctaggtctgaaattctgctttcagggtcctaacatcaacccttacttgg 421
Query: 123 ctgaacaaggtcctgattgtgtcttgaaaaatcatttctagttttccaagtctggggcat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ctgaacaaggtcctgattgtgtcttgaaaaatcatttctagttttccaagtctggggcat 361
Query: 183 gtgcagaccttgatgactgagtgttgttgaggaaggaacaattttgggcagggcatttta 242
| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 360 gcgcagaccttgatgactgagtgttgctgaggaaggaacagttttgggcagggcatttta 301
Query: 243 actctcttgcgtacaattactgcaccgaataccagtcagtttagcaagtctcatgaggct 302
|||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 300 actcccttgtgtacaattactgcaccgaatacaagtcagtttagcaagtctcatgagact 241
Query: 303 ccttctgtctgatgcaaaggtggaagactatttatttg 340
|||||||||||||| | |||||||||||||||||||||
Sbjct: 240 ccttctgtctgatgtagaggtggaagactatttatttg 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_m06.g1 MSMg01no143_m06.g1 CHROMAT_FILE:
MSMg01no143_m06.g1 PHD_FILE: MSMg01no143_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:24 2005
(325 letters)
>mm_chr5_127374763_127375486
Length = 724
Score = 590 bits (305), Expect = e-173
Identities = 320/325 (98%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 1 ctcaccagtggccacctttcaattcacacacacaaaatcttagacaggaacacaagtaag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ctcaccagtggccacctttcaattcacacacacaaaatcttagacaggtacacaagtaag 260
Query: 61 gagcagacctaagcccggaagtcctgagaccctagctcaaacaaccacacttccttgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcagacctaagcccggaagtcctgagaccctagctcaaacaaccacacttccttgagg 320
Query: 121 agtcttcactgtggtgacgtttcgggtggccgtacatttaatactgtcgatgtgagctag 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtcttcactgtggtgacgtt-cgggtggccgtacatttaatactgtcgatgtgagctag 379
Query: 181 aaaatgaaagcccaggaggtcattattatgtgttgacttgaaagggcgcaaagcgtttaa 240
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 380 aaaatgaaagcccaggaggtcattagcatgtgttgacttgaaagggcgcaaagcgtttaa 439
Query: 241 ccttcctgtggatgggatttgaagatgctgggcacatctctcctgcagaatgtctgcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccttcctgtggatgggatttgaagatgctgggcacatctctcctgcagaatgtctgcctt 499
Query: 301 ggcaatgagcctgcccatcgtcatt 325
||||||||||| |||||||||||||
Sbjct: 500 ggcaatgagccggcccatcgtcatt 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 724
Length adjustment: 9
Effective length of query: 316
Effective length of database: 715
Effective search space: 225940
Effective search space used: 225940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
