Query= MSMg01no143_m12.b1 MSMg01no143_m12.b1 CHROMAT_FILE:
MSMg01no143_m12.b1 PHD_FILE: MSMg01no143_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:25 2005
(124 letters)
>mm_chr5_22926467_22926990
Length = 524
Score = 207 bits (107), Expect = 2e-58
Identities = 118/123 (95%), Gaps = 4/123 (3%)
Strand = Plus / Minus
Query: 4 gaattccaggtc--ttcccggactaacagtaagaaaagttaggggtggagctggcaaagg 61
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaattccaggtcagt--caggactaacagtaagaaaagttaggggtggagctggcaaagg 267
Query: 62 ttttctgcctgattatagaaagagcagtgtgttgggttgttttgtttttactgattgttt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttttctgcctgattatagaaagagcagtgtgttgggttgttttgtttttactgattgttt 207
Query: 122 cat 124
|||
Sbjct: 206 cat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no143_m12.g1 MSMg01no143_m12.g1 CHROMAT_FILE:
MSMg01no143_m12.g1 PHD_FILE: MSMg01no143_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:25 2005
(332 letters)
>mm_chr5_22756156_22756888
Length = 733
Score = 629 bits (325), Expect = 0.0
Identities = 331/333 (99%), Gaps = 1/333 (0%)
Strand = Plus / Plus
Query: 1 tcccttctgtttta-aaagcaaatggtcgttccacattagtgcagagagtttgcatgtgg 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccttctgttttacaaagcaaatggtcgttccacattagtgcagagagtttgcatgtgg 260
Query: 60 tcaccttctgagtatctttcctgggccacatcaagtgcctgtctgttcccactcccaagt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaccttctgagtatctttcctgggccacatcaagtgcctgtctgttcccactcccaagt 320
Query: 120 cctcacaccctctgctaccttccctacattcagatgcaaaatagcaatgcctgctgcatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcacaccctctgctaccttccctacattcagatgcaaaatagcaatgcctgctgcatt 380
Query: 180 tagaactttggtcctgagccctgcctgatcactagacacatctaagtgaatctgtccata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaactttggtcctgagccctgcctgatcactagacacatctaagtgaatctgtccata 440
Query: 240 ttgaaaccacctaactgctaattgcttgctaattcctcccagataatctcagacaataca 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgaaaccacctaactgctaattgcttgctaattcctcccagataatctcagacaataca 500
Query: 300 gatccatctcaaccaagacctttgaagtcttag 332
|||||||||||||||||||||||||||||||||
Sbjct: 501 gatccatctcaaccaagacctttgaagtcttag 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 733
Length adjustment: 9
Effective length of query: 323
Effective length of database: 724
Effective search space: 233852
Effective search space used: 233852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
