Query= MSMg01no144_b04.b1 MSMg01no144_b04.b1 CHROMAT_FILE:
MSMg01no144_b04.b1 PHD_FILE: MSMg01no144_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:48 2005
(637 letters)
>mm_chr5_83147058_83148094
Length = 1037
Score = 1201 bits (621), Expect = 0.0
Identities = 630/633 (99%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 6 gaattc-atcagtgttccttataaatgaaacacattttttgtgtgtgctaatatcaattg 64
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatcagtgttccttataaatgaaacacattttttgtgtgtgctaatatcaattg 264
Query: 65 ctttcttttccactgttgctaaatgccccatatcatgctttctatataaacaactttgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttcttttccactgttgctaaatgccccatatcatgctttctatataaacaactttgat 324
Query: 125 agctaattaagctataacgaagagaagcttgctgttcaagttgaatgagagcaatgttaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agctaattaagctataacgaagagaagcttgctgttcaagttgaatgagagcaatgttaa 384
Query: 185 aatgtatttggcttctgttgcattcacaaatacaattccatgtgtgccttttgaatacac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatgtatttggcttctgttgcattcacaaatacaattccatgtgtgccttttgaatacac 444
Query: 245 actgctctcacattccattacaaacataaaggcgtgaaacaattgctgtgcaaatactaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actgctctcacattccattacaaacataaaggcgtgaaacaattgctgtgcaaatactaa 504
Query: 305 tagcttttaaaacttcatttttttatcagcagcttgtatttatatctgcttcctcaaagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagcttttaaaacttcatttttttatcagcagcttgtatttatatctgcttcctcaaagc 564
Query: 365 agcacttatttcagagccataatttataaataaatattaatgcaaattatatagggcact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agcacttatttcagagccataatttataaataaatattaatgcaaattatatagggcact 624
Query: 425 ataagaggtgtggataaatattgatatgatttcccagtaacttcaagtgtttattggttc 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 625 ataagaggtgtggataaatattgatatgatttcccagtaacttcaagtgtttattgtttc 684
Query: 485 ccctcaatatcactgggttctgacaggcatgattacaaacatataagcataagtttaatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 685 ccctcaatatcactgggttctgacaggcatgattacaaacatataagcatacgtttaatt 744
Query: 545 gcttaaatattcagatattgacataaatctttaagttaagaatttaacattttaattact 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gcttaaatattcagatattgacataaatctttaagttaagaatttaacattttaattact 804
Query: 605 ttttcccatattgccaaatgttttgaatgttgt 637
|||||||||||||||||||||||||||||||||
Sbjct: 805 ttttcccatattgccaaatgttttgaatgttgt 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_b04.g1 MSMg01no144_b04.g1 CHROMAT_FILE:
MSMg01no144_b04.g1 PHD_FILE: MSMg01no144_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:48 2005
(624 letters)
>mm_chr5_83219791_83220812
Length = 1022
Score = 1129 bits (584), Expect = 0.0
Identities = 614/624 (98%), Gaps = 2/624 (0%)
Strand = Plus / Minus
Query: 1 cattggatcttcagctatagaacaggaacctagttttaaaatctcaaaacataaaaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 cattggatcttcagctatagaacaggaacctagttttaaaatctcaaaacataaaaacta 763
Query: 61 atgcaaaacaaatgtatgacactttatcacactacaaattcacaagtactcattgaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 atgcaaaacaaatgtatgacactttatcacactacaaattcacaagtactcattgaaatt 703
Query: 121 aatcttttatgctaatacattacttatattaacaatgaaatctcatgaaatcccttggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aatcttttatgctaatacattacttatattaacaatgaaatctcatgaaatcccttggta 643
Query: 181 tctacaagcaacttatcaatagaccataggaaaaatccttaaaagttttagggttaacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tctacaagcaacttatcaatagaccataggaaaaatccttaaaagttttagggttaacag 583
Query: 241 caaacacttccttaaaatttttttcccaaagttagtatatggagtttgagaactattcaa 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 caaacacttccttaaa-tttttttcccaaagttagtatatggagtttgagaactattcaa 524
Query: 301 tatatcaatgggtggatatgtcatcttggcaaaacaatgacaatcaccttatttttagat 360
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 523 aatatcaatgggtggatatgtcatcttggcaaaacaatgacaagcacattatttttagat 464
Query: 361 ctaaaataatcagtgtattcatattcaaattagtttccttgtgcattacataaaattcag 420
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 463 ctaaaataaccagtgtattcatattcaaattagtttctttgtgcattacataaaattcag 404
Query: 421 aattccaaatgaatactatgaccagctattgaaatgttgataattaatttaagtttgtat 480
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 403 aattccaaatgaatactatgaccagctattgaaatgttgatatttaatttaggtttgtat 344
Query: 481 cattaaatagaataaagggccattcattacacaggcatgaaagttaagaaagaaaattat 540
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 343 cactaaatagaataaagggccattcattacacaggcatgaaagttaagaaagaaaatt-t 285
Query: 541 gctgtagctaatcaccactaggaaagttttccttaggtttaagcaaagaaaaatatgttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gctgtagctaatcaccactaggaaagttttccttaggtttaagcaaagaaaaatatgttt 225
Query: 601 gcacttcctctcaacaaagaagct 624
||||||||||||||||||||||||
Sbjct: 224 gcacttcctctcaacaaagaagct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1022
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1012
Effective search space: 621368
Effective search space used: 621368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
