Query= MSMg01no144_h08.b1 MSMg01no144_h08.b1 CHROMAT_FILE:
MSMg01no144_h08.b1 PHD_FILE: MSMg01no144_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:18 2005
(364 letters)
>mm_chr5_116113537_116114300
Length = 764
Score = 650 bits (336), Expect = 0.0
Identities = 354/360 (98%)
Strand = Plus / Minus
Query: 5 gaattctcaagtactgcagttgtttgtgctgttgagtttctcagagctgggtcttgctga 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaattctcaagtactggagttgtttgtgctgttgagtttctcagagctgggtcttgctga 505
Query: 65 ctggatcccccatacagcctgctctgtgtccctcctgcctctgtttttctgcgagttgtt 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 504 ctggatcccccatacagcctgctccgtgtccctcctgcctctgtttttctgcgagttgtt 445
Query: 125 ggccagtctagctgcagggtccagttgtggccagtgcttgccgtggtgtggctcagcagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggccagtctagctgcagggtccagttgtggccagtgcttgccgtggtgtggctcagcagc 385
Query: 185 ccagcctgtgctttcttccccacagctgcaccaaagccagctggagctccaggaggtgcg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccagcctgtgctttcttccccacagctgcaccaaagccagctggagctccaggaggtgcg 325
Query: 245 gctgtcctaccggcagctgcagggcaaggtggattaactcacggaggagaggagtttgca 304
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 gctgtcctaccggcagctgcagggcaaggtggaggaactcacggaggagaggagtttgca 265
Query: 305 gagctcggccgcgaccagcacgtccctgctatcagagatcgagcagagcatggaggccga 364
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 264 gagctcggctgcgaccagcacgtccctgctgtcagagatcgagcagagcatggaggccga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_h08.g1 MSMg01no144_h08.g1 CHROMAT_FILE:
MSMg01no144_h08.g1 PHD_FILE: MSMg01no144_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:18 2005
(292 letters)
>mm_chr5_115985394_115986083
Length = 690
Score = 522 bits (270), Expect = e-153
Identities = 280/284 (98%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 ctacagagtgttgaggccttaggtccctaggcatggtaggggcagagatctggcttaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacagagtgttgaggccttaggtccctaggcatggtaggggcagagatctggcttaact 260
Query: 61 gtgtattggctggccacagccaccttccccgaggatagacagttaccaggataaatatac 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gt--attggctggccacagccaccttccccgaggatagacagttaccaggataaatatac 318
Query: 121 ccggctttccattcctggggagttactcactgagtcgaagcaccccactgtgggttaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccggctttccattcctggggagttactcactgagtcgaagcaccccactgtgggttaggt 378
Query: 181 tacctctgctctaactgctctcgggctctggcggcttgaggggacagggactgggcagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tacctctgctctaactgctctcgggctctggcggcttgaggggacagggactgggcagaa 438
Query: 241 gccatgggagggggaggggcggttctgcctctagttccttcctc 284
|||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 439 gccatgggagggggaggggcgggtctgcctcttgttccttcctc 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 690
Length adjustment: 9
Effective length of query: 283
Effective length of database: 681
Effective search space: 192723
Effective search space used: 192723
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
