Query= MSMg01no145_o17.b1 MSMg01no145_o17.b1 CHROMAT_FILE:
MSMg01no145_o17.b1 PHD_FILE: MSMg01no145_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:09 2005
(621 letters)
>mm_chr5_127148161_127149179
Length = 1019
Score = 1116 bits (577), Expect = 0.0
Identities = 610/621 (98%), Gaps = 2/621 (0%)
Strand = Plus / Plus
Query: 1 ggttctcatgcttgtgtggcgagatttttaaccacttgaacaatcttcccagcccctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggttctcatgcttgtgtggcgagatttttaaccacttgaacaatcttcccagcccctcaa 260
Query: 61 ttatgaaatttcaacttagctttagagcattacattgggatttgtacagcaagaaaaata 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ttatgaaatttcaacttagctttagagcattgcattgggatttgtacagcaagaaaaata 320
Query: 121 tctattttgaatgctaaactacaaacaagctaatctataaacaataagttacactaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctattttgaatgctaaactacaaacaagctaatctataaacaataagttacactaaaca 380
Query: 181 agtcaactacttttttaaaaaaaaatagaatcatccacttctcaaagcagtaatacatat 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcaactac-tttttaaaaaaaaatagaatcatccacttctcaaagcagtaatacatat 439
Query: 241 tagcaggttagaattaaatgatactaaaatctgatttcaaattttttttttgtattagtt 300
|||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 440 tagcaggttacaattaaatgatactaaaatctgatttcaaa-ttattttttgtattagtt 498
Query: 301 gcttttctgacattaaaatactatgaagaggagcaaagttccaaacgccaacacgtgtta 360
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 499 gcttttctgacattaaaatactatgaagaggagcaaagttccaaacgttaagacgtgtta 558
Query: 361 tggcttaaggttccaaagggagggctccattatgggagggaaggcaggaacgggaggttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggcttaaggttccaaagggagggctccattatgggagggaaggcaggaacgggaggttt 618
Query: 421 gccaatcacatttcatcttatccacacataggaaacagcaagaacaggaagtagagtgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gccaatcacatttcatcttatccacacataggaaacagcaagaacaggaagtagagtgag 678
Query: 481 gctatgaactctcaaaacccaccccaaatgatgtattcccttcggcaagccttcaccttc 540
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 679 gctatgaactcccaaaacccaccccaaatgatgtattccctccggcaagccttcaccttc 738
Query: 541 caacctctacccaaacagtgccatctgctgggtattgagtgttcatacacctgagtctgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 caacctctacccaaacagtgccatctgctgggtattgagtgttcatacacctgagtctgt 798
Query: 601 ggggggcattttttactcaaa 621
||||| |||||||||||||||
Sbjct: 799 gggggacattttttactcaaa 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1019
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1009
Effective search space: 616499
Effective search space used: 616499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_o17.g1 MSMg01no145_o17.g1 CHROMAT_FILE:
MSMg01no145_o17.g1 PHD_FILE: MSMg01no145_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:09 2005
(137 letters)
>mm_chr5_127285996_127286532
Length = 537
Score = 234 bits (121), Expect = 2e-66
Identities = 133/137 (97%)
Strand = Plus / Minus
Query: 1 ccctttccaatcctttgacttattataaaaatagaagtaaaaatgcctgaggtgtgtgta 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 301 ccctttccaatcctttgacttattataaaaatagaagtaaagatgcctgaggtgtatgta 242
Query: 61 tgttgcatatatgtagcatatttatgtgccatatgaatgttcgtgtgtgtgtgtgtgtgt 120
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 241 tgttgcatatatgtagcatatttatgtgccgtatgaatgtttgtgtgtgtgtgtgtgtgt 182
Query: 121 gtgtgtgtgtgtgtgtg 137
|||||||||||||||||
Sbjct: 181 gtgtgtgtgtgtgtgtg 165
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 137
Length of database: 537
Length adjustment: 8
Effective length of query: 129
Effective length of database: 529
Effective search space: 68241
Effective search space used: 68241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
