Query= MSMg01no147_h13.b1 MSMg01no147_h13.b1 CHROMAT_FILE:
MSMg01no147_h13.b1 PHD_FILE: MSMg01no147_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:04 2005
(654 letters)
>mm_chr5_81604529_81605582
Length = 1054
Score = 1178 bits (609), Expect = 0.0
Identities = 639/655 (97%), Gaps = 11/655 (1%)
Strand = Plus / Plus
Query: 1 ccgtgtcacaacttactaattactggttggcaatttaaggacaaattgcttcctatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccgtgtcacaacttactaattactggttggcaatttaaggacaaattgcttcctatattt 260
Query: 61 ttcaacaaaacagtggtcagatttttttgttgttgttgttgttcaaaaatcagccaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaacaaaacagtggtcagatttttttgttgttgttgttgttcaaaaatcagccaggca 320
Query: 121 gtggtggcacacacctttaatcccatcagaggcaggcggatttctgagttcgaggccaac 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 gtggtggcacacacctttaatcccatcagaggcaggcgaatttctgagttcgaggccaac 380
Query: 181 cttgtcttcatagtgagttccaggacagccagggctatacagagaaaccccatctc-aaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 cttgtcttcatagtgagttccaggacagccagggctatacagagaaaccccatctcaaaa 440
Query: 240 aaataaaataaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaaacagaaagaaa 299
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaataaaata----------aaaacaaaacaaaacaaaacaaaacaaaaacagaaagaaa 490
Query: 300 aaccaaaacaaaaaattcagacaaaagaaaatcaaatagtcaattataataacattaatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaccaaaacaaaaaattcagacaaaagaaaatcaaatagtcaattataataacattaatt 550
Query: 360 ttgaatcctaccactatatgcccattacaatgtctgttggcactagagcatttaaagggc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ttgaatcctaccactatatgcccattacaatgtctgttggcactagagcatttaaagggc 610
Query: 420 atttcccatgttatattgcaagaagtaatgaactattacttacttttataaaataaatta 479
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 611 atttcccatgttatattgcaagaagtaatgacctattacttacttttataaaataaatta 670
Query: 480 taactattaacttacagcactattataataaattgactgcttattatccttgttacattt 539
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 671 taactattaacttacagcactatcctaataaattgactgcttattttccttgttacattt 730
Query: 540 ttacttcatattttctgcaattttaatagaaataagacttttttgatagcttcacaccaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ttacttcatattttctgcaattttaatagaaataagacttttttgatagcttcacaccaa 790
Query: 600 aattattattagataatacagtagaatttttgagatgtgttgaatgatagcagtt 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 aattattattagataatacagtagaatttttgagatgtgttgaatgatagcagtt 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_h13.g1 MSMg01no147_h13.g1 CHROMAT_FILE:
MSMg01no147_h13.g1 PHD_FILE: MSMg01no147_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:04 2005
(635 letters)
>mm_chr5_81741056_81742090
Length = 1035
Score = 1214 bits (628), Expect = 0.0
Identities = 633/635 (99%)
Strand = Plus / Minus
Query: 1 cctggttggtgataatcctagtagaggtactttgccattcagcacttccatatatcattc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 835 cctggttggtgataatcctagtagaggtactttgccattcagtacttccatatatcattc 776
Query: 61 ataacaaatcacgttggtagtaacaggttatggtaacaaagccatggatgtgttgtgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ataacaaatcacgttggtagtaacaggttatggtaacaaagccatggatgtgttgtgagg 716
Query: 121 aagaccttgaatcaaataatcttacgtctgtggtcatggaagcagtaggcaatacatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aagaccttgaatcaaataatcttacgtctgtggtcatggaagcagtaggcaatacatctg 656
Query: 181 attatttgctctgtagaagggacttccaaccaagctactattcaaaacggtgtattccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 attatttgctctgtagaagggacttccaaccaagctactattcaaaacggtgtattccgt 596
Query: 241 ttttctaaagggcaacttcactggacctcagaaatgtaaagaggaggtaacacaaatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttttctaaagggcaacttcactggacctcagaaatgtaaagaggaggtaacacaaatgaa 536
Query: 301 tgtgtttgggggagaaaaacagattttattaggtaacacaaattttagttctaccatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgtgtttgggggagaaaaacagattttattaggtaacacaaattttagttctaccatttg 476
Query: 361 gtggttcaaattatgcagtatttcattgaccctggattggcaggaacactaataacttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gtggttcaaattatgcagtatttcattgaccctggattggcaggaacactaataacttct 416
Query: 421 gttctgttatatctgagctctaatcactggtttatttctccatttatgagcaatctggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gttctgttatatctgagctctaatcactggtttatttctccatttatgagcaatctggat 356
Query: 481 atcaaaactgatcattaaagccctttatttcctgcaaggttagaaagggcatcatgtaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atcaaaactgatcattaaagccctttatttcctgcaaggttagaaagggcatcatgtaag 296
Query: 541 ctaaaactaanaggataaaactagaaaagataaacttatccttggaaaacctcactatta 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ctaaaactaaaaggataaaactagaaaagataaacttatccttggaaaacctcactatta 236
Query: 601 cttgcactgctatggataaacaacattaaggtgat 635
|||||||||||||||||||||||||||||||||||
Sbjct: 235 cttgcactgctatggataaacaacattaaggtgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
