Query= MSMg01no148_j16.b1 MSMg01no148_j16.b1 CHROMAT_FILE:
MSMg01no148_j16.b1 PHD_FILE: MSMg01no148_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:33 2005
(558 letters)
>mm_chr5_82621602_82622558
Length = 957
Score = 1019 bits (527), Expect = 0.0
Identities = 548/557 (98%), Gaps = 5/557 (0%)
Strand = Plus / Plus
Query: 4 gaattctattaagatattcttaaattctattaagaatatctatttggaagtaaaaacaac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctattaagatattcttaaattctattaagaatatctatttggaagtaaaaacaac 263
Query: 64 aaaggacccagaggaatctacaaagttccagagttgggtagagccaaaacaaacatagac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 264 aaaggacccagaggaatctacaaagttccagagttgggtagagccaaaacaaatatagac 323
Query: 124 ttccctaagctaagtaatgttatccgtgtgacttaaaattctaaaacgttagtgagtttg 183
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 ttccctaagctaagtaatgttatccgtgtgacttaaaattctgaaacgttagtgagtttg 383
Query: 184 aaaaaataataaagtatttgggctcaaattaattagatttcattactgttttggttcaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaaaataataaagtatttgggctcaaattaattagatttcattactgttttggttcaca 443
Query: 244 ctttaacatttagtcataatctcttaaaatcttacaaaaactgtgttgctcatttaggga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctttaacatttagtcataatctcttaaaatcttacaaaaactgtgttgctcatttaggga 503
Query: 304 ataaatttgaagaattatagggttggaagaaagtttttcaaagttggaaactcaataaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ataaatttgaagaattatagggttggaagaaagtttttcaaagttggaaactcaataaaa 563
Query: 364 tttctatctttcaccc--gctccaaaatataaggaatgctgaaataaaatttatattgtc 421
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttctatctttca---ttgctccaaaatataaggaatgctgaaataaaatttatattgtc 620
Query: 422 tgtttcagtaaatattattcatgctttagatatttttatatataaaagatctggttttac 481
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtttcagtaaatattgttcatgctttagatatttttatatataaaagatctggttttac 680
Query: 482 aacattagattattgttttgttgaaggtttcagtgttaatgaggagcaccacatgagtta 541
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 aacattagattattgttttgttgaaggtttcaatgttaatgaggagcaccacatgagtta 740
Query: 542 atcattggttaatacct 558
|||||||||||||||||
Sbjct: 741 atcattggttaatacct 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 957
Length adjustment: 10
Effective length of query: 548
Effective length of database: 947
Effective search space: 518956
Effective search space used: 518956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_j16.g1 MSMg01no148_j16.g1 CHROMAT_FILE:
MSMg01no148_j16.g1 PHD_FILE: MSMg01no148_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:33 2005
(240 letters)
>mm_chr5_82716715_82717354
Length = 640
Score = 433 bits (224), Expect = e-126
Identities = 236/240 (98%)
Strand = Plus / Minus
Query: 1 attttctctggagagatatatggtacagggaagagaccatatcctgtggaatcacagata 60
||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 440 attttctgtggagagatatatggtacagggaagagaccataagctgtggaatcacagata 381
Query: 61 attgctttcagaattctcatacagaaacattctgtttttgttatttatagaggctctaaa 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 380 attgctttcagaattctcatacagaaacattctggttttgttatttatagaggctctaaa 321
Query: 121 aaactcctttactgactgcacaaagagctttacctgtaacacaatgtaatccggaaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaactcctttactgactgcacaaagagctttacctgtaacacaatgtaatccggaaagtc 261
Query: 181 tagcaacatggtgaacagtccctttggccatatttgagattttattcttgctgtccaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tagcaacatggtgaacagtccctttggccatatttgagattttattcttgctgtccaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
