Query= MSMg01no151_b06.b1 MSMg01no151_b06.b1 CHROMAT_FILE:
MSMg01no151_b06.b1 PHD_FILE: MSMg01no151_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:48 2005
(433 letters)
>mm_chr5_57100427_57101258
Length = 832
Score = 750 bits (388), Expect = 0.0
Identities = 418/430 (97%), Gaps = 7/430 (1%)
Strand = Plus / Minus
Query: 7 gaattctggatatat---cctattgtgtttcctggtaggctattcatactctggcagatc 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gaattctggatagataaa--tattgtgtttcctggtaggctattcatactctggcagatc 575
Query: 64 tatccaaacagagaagtatacagatagcacaatttggagctaatgagttattatcaaata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tatccaaacagagaagtatacagatagcacaatttggagctaatgagttattatcaaata 515
Query: 124 acacaaaatattatttaaatgatattttaccaatgatgtcaagaaacctataggataaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 acacaaaatattatttaaatgatattttaccaatgatgtcaagaaacctataggataaga 455
Query: 184 aataatctaatttaattcaataaaatgagcagagataacatcaaaggagactaagatctc 243
||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 454 aataatc-aatttaattcaataaaatgatcagagataacatcaaaggaggctaagatctc 396
Query: 244 taccaatgggtgtttaataatgtagtctaggaagaaaaattatatgtaatctaatatatt 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 395 taccaatgggtgtttaataatgtagtctaggaagaaaaatgatatgtaatctaatatatt 336
Query: 304 gacacttcaagaagncaaatgacaggcattttaatgataatacgactagtgattgggttt 363
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gacacttcaagaag-caaatgacaggcattttaatgataatacgactagtgattgggttt 277
Query: 364 aggaagttcaggcattccacaaagaatttgcagaaattttagaatctcattttttcactt 423
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aggaagttcaggtattccacaaagaatttgcagaaattttagaatctcattttttcactt 217
Query: 424 agtttatcag 433
||||||||||
Sbjct: 216 agtttatcag 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 832
Length adjustment: 9
Effective length of query: 424
Effective length of database: 823
Effective search space: 348952
Effective search space used: 348952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_b06.g1 MSMg01no151_b06.g1 CHROMAT_FILE:
MSMg01no151_b06.g1 PHD_FILE: MSMg01no151_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:48 2005
(651 letters)
>mm_chr5_56959159_56960209
Length = 1051
Score = 1205 bits (623), Expect = 0.0
Identities = 644/651 (98%)
Strand = Plus / Plus
Query: 1 tgtgtcagctacagtcctttcagaagtcagtgcttggttttcgagtcgggctgcacatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtcagctacagtcctttcagaagtcagtgcttggttttcgagtcgggctgcacatat 260
Query: 61 tctgagtgtcaattatctctgtagcaatttcaaaccatgtgtgcagcccatcaccagcca 120
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 261 tctgagtgtcaattatctctgtagcaatttcacaccatgtgtacagcccatcaccagcca 320
Query: 121 gcttctacaatcaccatcttatatttttcgttgaaaaaagaactgtcaaaaatcttagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 gcttctacaatcaccatcttatatttttcgttgaaaaaagaactgtcaaaagtcttagag 380
Query: 181 taagcgtaggtgaaatgagaattatcaatcacacaggcctattttctacaagggaaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagcgtaggtgaaatgagaattatcaatcacacaggcctattttctacaagggaaggac 440
Query: 241 gtgaatgatgcctggtcacctggaatgacagagcgaatgtggtttaacaacctggtgatt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaatgatgcctggtcacctggaatgacagagcgaatgtggtttaacaacctggtgatt 500
Query: 301 cttttttattcttagaagcctccatctgaatctcctcaatatcttgcacattgtttaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttttttattcttagaagcctccatctgaatctcctcaatatcttgcacattgtttaggc 560
Query: 361 cccaatcctgagctttctttctcagtgaataaaacttatccttataaaagagactccagg 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 cccaatcctgagctttctttctcagtgaatagaacttatccttataaaagagactccagg 620
Query: 421 tgttttgcatcctctacaaatagaatccatccttatgcttattaaatatctttcgtctag 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 tgttttgcatcctctacaaatagaatccatccttatgcttattaaatatctttcctctag 680
Query: 481 accttaaccctgagttctgtttgtcagcaaatagacaagtttttattgtgaagatcatag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 accttaaccctgagttctgtttgtcagcaaatagacaagtttttattgtgaagatcatag 740
Query: 541 tttctttgcattttgctgggaaatttctatgtaactatgcctaaagccttggtgtgggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttctttgcattttgctgggaaatttctatgtaactatgcctaaagccttggtgtgggaa 800
Query: 601 ttgtcacgcgaaaactttccctcaaattttgattatggtattgcttgtaag 651
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttgtcatgcgaaaactttccctcaaattttgattatggtattgcttgtaag 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
